Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.17□□□□□ -2.38
COL5A3P25940 RNU6-388P-201ENST00000517012 105 ntBASIC0.17□□□□□ -2.38
COL5A3P25940 RNU6-389P-201ENST00000517048 105 ntBASIC0.17□□□□□ -2.38
COL5A3P25940 MIR4500-201ENST00000579472 76 ntBASIC0.17□□□□□ -2.38
COL5A3P25940 MIR3121-201ENST00000579680 77 ntBASIC0.17□□□□□ -2.38
COL5A3P25940 MIR6082-201ENST00000613604 109 ntBASIC0.17□□□□□ -2.38
COL5A3P25940 SNORD115-2-201ENST00000362842 82 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU4-58P-201ENST00000363192 141 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-978P-201ENST00000364371 103 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 SNORA25.7-201ENST00000364375 127 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 Y_RNA.233-201ENST00000364407 101 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU4-16P-201ENST00000364737 141 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 SNORD115-20-201ENST00000365099 82 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 MIR644A-201ENST00000385262 94 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-240P-201ENST00000516098 97 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 AP002392.1-201ENST00000537692 208 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 AC022523.2-201ENST00000561045 150 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 AC141846.1-201ENST00000568348 142 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 SNORA22.1-201ENST00000362701 134 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 Y_RNA.52-201ENST00000362760 96 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU4-84P-201ENST00000364200 139 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-690P-201ENST00000365242 106 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU4-45P-201ENST00000365469 141 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-945P-201ENST00000383947 107 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 Y_RNA.401-201ENST00000383965 117 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 Y_RNA.521-201ENST00000384560 114 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-239P-201ENST00000390990 99 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 Y_RNA.662-201ENST00000516028 97 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 SNORA25.16-201ENST00000516741 121 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-861P-201ENST00000516745 106 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 Y_RNA.697-201ENST00000516776 113 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 RNU6-1149P-201ENST00000516810 97 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 AC130289.1-201ENST00000577321 73 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 AC021753.1-201ENST00000635724 168 ntBASIC0.16□□□□□ -2.38
COL5A3P25940 MIR101-2-201ENST00000362195 79 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 Y_RNA.8-201ENST00000362353 102 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 Y_RNA.13-201ENST00000362403 112 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 RNA5SP133-201ENST00000363368 119 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 Y_RNA.174-201ENST00000363781 105 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 MT-TG-201ENST00000387429 68 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 RNU6-1321P-201ENST00000390905 107 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 Y_RNA.584-201ENST00000391090 114 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 Y_RNA.588-201ENST00000391254 102 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 SNORA40.8-201ENST00000411034 126 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 BX276092.1-201ENST00000427368 251 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 RNU2-35P-201ENST00000516446 142 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 RNU6-531P-201ENST00000516694 104 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 AC133485.4-201ENST00000561835 220 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 AC138907.4-201ENST00000570107 226 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 MIR4645-201ENST00000583158 77 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 AC021443.1-201ENST00000604478 211 ntBASIC0.15□□□□□ -2.39
COL5A3P25940 Y_RNA.49-201ENST00000362714 112 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 SNORD114-10-201ENST00000363409 72 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 SNORA36.1-201ENST00000363424 132 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 RNA5SP517-201ENST00000364724 117 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 Y_RNA.423-201ENST00000384057 113 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 RNU6-429P-201ENST00000384582 108 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 MIR635-201ENST00000384830 98 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 RNU2-59P-201ENST00000410482 191 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 RNU6-469P-201ENST00000516253 101 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 SNORD67.1-201ENST00000516618 108 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 IGKV1-22-201ENST00000524313 326 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 DEFB131E-201ENST00000532329 154 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 AC112693.2-201ENST00000556538 232 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 AC138749.4-201ENST00000563970 127 ntBASIC0.14□□□□□ -2.39
COL5A3P25940 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.14□□□□□ -2.39
COL5A3P25940 RNU6-1318P-201ENST00000365389 103 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 Y_RNA.435-201ENST00000384095 112 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 AL603914.1-201ENST00000401964 204 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNA5SP144-201ENST00000410846 116 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 AC069271.1-201ENST00000445577 156 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNU7-123P-201ENST00000515911 60 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNU6-1219P-201ENST00000516143 112 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNA5SP94-201ENST00000516917 108 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNU2-60P-201ENST00000517290 128 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 AC072026.1-201ENST00000605023 201 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 AC105081.1-201ENST00000617727 106 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 AC244669.1-204ENST00000621564 178 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 MIR4315-1-201ENST00000636800 73 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 MIR4315-2-201ENST00000640925 73 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNU6-1020P-201ENST00000363684 107 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNA5SP245-201ENST00000364239 121 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 Y_RNA.297-201ENST00000364950 91 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 Y_RNA.366-201ENST00000365540 102 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNU6-1184P-201ENST00000384588 108 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 Y_RNA.793-201ENST00000411222 111 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 RNU7-121P-201ENST00000516604 62 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 AC004792.1-201ENST00000614523 137 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 AL137067.1-201ENST00000615933 120 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 MIR6755-201ENST00000619993 66 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 MIR6841-201ENST00000637129 72 ntBASIC0.13□□□□□ -2.39
COL5A3P25940 Y_RNA.272-201ENST00000364696 102 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 SNORD115-35-201ENST00000365122 82 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 SNORA8.2-201ENST00000384372 139 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 SNORA72.6-201ENST00000384520 129 ntBASIC0.12□□□□□ -2.39
COL5A3P25940 SNORD28-201ENST00000384706 75 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms