Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 OR2A41P-201ENST00000473586 105 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 Y_RNA.709-201ENST00000516952 92 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 RNU6-548P-201ENST00000517083 115 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.3□□□□□ -2.2
VAMP1P23763 MIR8066-201ENST00000617280 78 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.3□□□□□ -2.2
VAMP1P23763 RNU6-1313P-201ENST00000362622 102 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 Y_RNA.42-201ENST00000362660 108 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 RNU6-1335P-201ENST00000365426 107 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 SNORA22-201ENST00000383907 134 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 RNU6-1014P-201ENST00000383940 103 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
VAMP1P23763 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 AC096949.1-201ENST00000412047 152 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 AP003327.1-201ENST00000529684 127 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 AC008608.1-201ENST00000603910 127 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 RNU7-10P-201ENST00000607194 63 ntBASIC1.29□□□□□ -2.2
VAMP1P23763 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
VAMP1P23763 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VAMP1P23763 SNORA26.9-201ENST00000391322 122 ntBASIC1.28□□□□□ -2.2
VAMP1P23763 RNU6-469P-201ENST00000516253 101 ntBASIC1.28□□□□□ -2.2
VAMP1P23763 AC141557.1-201ENST00000540982 400 ntBASIC1.28□□□□□ -2.2
VAMP1P23763 AC015712.3-201ENST00000559380 164 ntBASIC1.28□□□□□ -2.2
VAMP1P23763 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
VAMP1P23763 Y_RNA.10-201ENST00000362371 110 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 RNU6-535P-201ENST00000384722 107 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 SNORA40.18-201ENST00000391200 128 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 Y_RNA.659-201ENST00000515994 113 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 RNU6-589P-201ENST00000516485 107 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 MIR4694-201ENST00000578534 80 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 AL645939.4-201ENST00000604495 135 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 MIR502-201ENST00000606349 86 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 AL442128.1-201ENST00000615151 90 ntBASIC1.27□□□□□ -2.21
VAMP1P23763 RNA5SP432-201ENST00000362480 116 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 SNORD38.1-201ENST00000363863 68 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 Y_RNA.323-201ENST00000365157 109 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 SNORD20-201ENST00000384550 80 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 MIR583-201ENST00000384846 75 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 RNU6-919P-201ENST00000516731 104 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 MIR548H5-201ENST00000580314 60 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 RNU6-90P-201ENST00000606352 106 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 AL353997.5-201ENST00000618886 171 ntBASIC1.26□□□□□ -2.21
VAMP1P23763 RNY3P2-201ENST00000362918 102 ntBASIC1.25□□□□□ -2.21
VAMP1P23763 RNU6-1113P-201ENST00000384348 107 ntBASIC1.25□□□□□ -2.21
VAMP1P23763 MIR4769-201ENST00000584126 77 ntBASIC1.25□□□□□ -2.21
VAMP1P23763 MIR8081-201ENST00000611533 95 ntBASIC1.25□□□□□ -2.21
VAMP1P23763 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
VAMP1P23763 RNU6-1201P-201ENST00000384227 107 ntBASIC1.24□□□□□ -2.21
VAMP1P23763 Y_RNA.536-201ENST00000384621 113 ntBASIC1.24□□□□□ -2.21
VAMP1P23763 MIR573-201ENST00000384964 99 ntBASIC1.24□□□□□ -2.21
VAMP1P23763 RNA5SP222-201ENST00000411039 105 ntBASIC1.24□□□□□ -2.21
VAMP1P23763 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.24□□□□□ -2.21
VAMP1P23763 BX276092.1-201ENST00000427368 251 ntBASIC1.24□□□□□ -2.21
VAMP1P23763 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.24□□□□□ -2.21
VAMP1P23763 AL353765.1-201ENST00000605514 183 ntBASIC1.24□□□□□ -2.21
VAMP1P23763 Y_RNA.163-201ENST00000363702 113 ntBASIC1.23□□□□□ -2.21
VAMP1P23763 AL591806.2-201ENST00000433122 173 ntBASIC1.23□□□□□ -2.21
VAMP1P23763 RNA5SP458-201ENST00000516188 119 ntBASIC1.23□□□□□ -2.21
VAMP1P23763 ACA64.5-201ENST00000516207 127 ntBASIC1.23□□□□□ -2.21
VAMP1P23763 RNU6-832P-201ENST00000363319 107 ntBASIC1.22□□□□□ -2.21
VAMP1P23763 Y_RNA.174-201ENST00000363781 105 ntBASIC1.22□□□□□ -2.21
VAMP1P23763 MIR635-201ENST00000384830 98 ntBASIC1.22□□□□□ -2.21
VAMP1P23763 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
VAMP1P23763 RNU6-295P-201ENST00000516901 104 ntBASIC1.22□□□□□ -2.21
VAMP1P23763 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VAMP1P23763 MIR577-201ENST00000385196 96 ntBASIC1.21□□□□□ -2.22
VAMP1P23763 MIR548G-201ENST00000408442 89 ntBASIC1.21□□□□□ -2.22
VAMP1P23763 MIR3612-201ENST00000579753 87 ntBASIC1.21□□□□□ -2.22
VAMP1P23763 Y_RNA.56-201ENST00000362798 112 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 SNORD45B-201ENST00000364617 72 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 MIR608-201ENST00000384820 100 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 MIR1323-201ENST00000408090 73 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 SNORD100-201ENST00000408573 76 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 AL035461.1-201ENST00000421490 332 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 AC002350.1-201ENST00000490759 375 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 uc_338.28-201ENST00000612082 187 ntBASIC1.2□□□□□ -2.22
VAMP1P23763 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VAMP1P23763 RNU6-215P-201ENST00000365169 102 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 Y_RNA.377-201ENST00000365644 108 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 SNORA51.5-201ENST00000384126 131 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 RNU6-571P-201ENST00000384128 107 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 MIR517C-201ENST00000385103 95 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 SNORA67.5-201ENST00000391036 107 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 AL354695.1-201ENST00000427935 228 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 AL031737.1-201ENST00000450125 223 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
VAMP1P23763 MIR337-201ENST00000362281 93 ntBASIC1.18□□□□□ -2.22
VAMP1P23763 RNU4-45P-201ENST00000365469 141 ntBASIC1.18□□□□□ -2.22
VAMP1P23763 SNORA36.2-201ENST00000384004 127 ntBASIC1.18□□□□□ -2.22
VAMP1P23763 RNU6-291P-201ENST00000384720 107 ntBASIC1.18□□□□□ -2.22
VAMP1P23763 RNY4P18-201ENST00000391107 89 ntBASIC1.18□□□□□ -2.22
VAMP1P23763 HSBP1P2-201ENST00000299671 229 ntBASIC1.17□□□□□ -2.22
VAMP1P23763 AL353813.1-201ENST00000440700 253 ntBASIC1.17□□□□□ -2.22
VAMP1P23763 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.17□□□□□ -2.22
VAMP1P23763 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.17□□□□□ -2.22
VAMP1P23763 AC138907.6-201ENST00000568401 126 ntBASIC1.17□□□□□ -2.22
VAMP1P23763 AC138869.1-201ENST00000568623 124 ntBASIC1.17□□□□□ -2.22
VAMP1P23763 RNU6-1099P-201ENST00000363533 107 ntBASIC1.16□□□□□ -2.22
VAMP1P23763 RNU6-756P-201ENST00000383997 107 ntBASIC1.16□□□□□ -2.22
VAMP1P23763 AC244098.3-201ENST00000424803 96 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms