Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 SNORA44.1-201ENST00000517031 108 ntBASIC1.38□□□□□ -2.19
SNHG28P0DPA3 AC141846.1-201ENST00000568348 142 ntBASIC1.38□□□□□ -2.19
SNHG28P0DPA3 MIR3198-2-201ENST00000577868 80 ntBASIC1.38□□□□□ -2.19
SNHG28P0DPA3 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
SNHG28P0DPA3 SNORD38.1-201ENST00000363863 68 ntBASIC1.37□□□□□ -2.19
SNHG28P0DPA3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.37□□□□□ -2.19
SNHG28P0DPA3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.37□□□□□ -2.19
SNHG28P0DPA3 AC015688.6-201ENST00000577737 104 ntBASIC1.37□□□□□ -2.19
SNHG28P0DPA3 MIR4713-201ENST00000582691 75 ntBASIC1.37□□□□□ -2.19
SNHG28P0DPA3 IGLL4P-201ENST00000614590 133 ntBASIC1.37□□□□□ -2.19
SNHG28P0DPA3 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
SNHG28P0DPA3 MIR6740-201ENST00000618268 113 ntBASIC1.37□□□□□ -2.19
SNHG28P0DPA3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
SNHG28P0DPA3 MIR337-201ENST00000362281 93 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 SNORD114-10-201ENST00000363409 72 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 SNORA2B-201ENST00000384583 137 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 MIR513A1-201ENST00000385138 129 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 MIR548G-201ENST00000408442 89 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 JTBP1-201ENST00000441314 247 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 AP003716.2-201ENST00000528260 108 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 AC025521.1-201ENST00000621624 286 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 AC006160.2-201ENST00000637708 154 ntBASIC1.36□□□□□ -2.19
SNHG28P0DPA3 RNA5SP259-201ENST00000365541 109 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 SNORD116-22-201ENST00000384430 92 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 Y_RNA.567-201ENST00000384736 106 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 RNU4-83P-201ENST00000410863 133 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 HSPE1P24-201ENST00000450782 238 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 RNU7-48P-201ENST00000458875 63 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 AC005908.1-201ENST00000468701 347 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 AL513043.2-201ENST00000573941 143 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.35□□□□□ -2.19
SNHG28P0DPA3 MIR30D-201ENST00000362283 70 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 MIR181B2-201ENST00000385004 89 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 MIR563-201ENST00000385080 79 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SNHG28P0DPA3 Y_RNA.609-201ENST00000410669 89 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 snoU13.2-201ENST00000459201 104 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 RNU7-171P-201ENST00000459581 62 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 SNORD111.1-201ENST00000516421 86 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 CYP3A52P-201ENST00000563326 91 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 MIR4666B-201ENST00000578142 81 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 MIR4439-201ENST00000583746 80 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 AL662814.1-201ENST00000617364 121 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 AC012676.2-201ENST00000619258 186 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 MIR548BB-201ENST00000626714 66 ntBASIC1.34□□□□□ -2.19
SNHG28P0DPA3 MIR302D-201ENST00000362275 68 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 RNU6-654P-201ENST00000364373 107 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 SNORD38B-201ENST00000384690 67 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 MIR1185-1-201ENST00000408598 86 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 MIR1276-201ENST00000408707 83 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 RNA5SP95-201ENST00000410319 137 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.33□□□□□ -2.2
SNHG28P0DPA3 SPINT5P-201ENST00000448174 155 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 AC138749.4-201ENST00000563970 127 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 AC096720.1-201ENST00000604441 183 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 SNORD38B-202ENST00000625943 69 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 MIR6516-201ENST00000630554 81 ntBASIC1.33□□□□□ -2.2
SNHG28P0DPA3 SNORD116-10-201ENST00000363791 102 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 RNU6-865P-201ENST00000364772 107 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 MIR588-201ENST00000384900 83 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 RNU6-205P-201ENST00000390858 107 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.32□□□□□ -2.2
SNHG28P0DPA3 AC090897.1-201ENST00000580909 226 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 RNU6-90P-201ENST00000606352 106 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 AC103810.8-201ENST00000607347 118 ntBASIC1.32□□□□□ -2.2
SNHG28P0DPA3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.32□□□□□ -2.2
SNHG28P0DPA3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SNHG28P0DPA3 RNU6-633P-201ENST00000362612 103 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 RNA5SP133-201ENST00000363368 119 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 RNU6-509P-201ENST00000363519 107 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 RNU6-949P-201ENST00000384040 107 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 Y_RNA.437-201ENST00000384113 113 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 RNU6-524P-201ENST00000384270 107 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 Y_RNA.611-201ENST00000410682 108 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 AC027119.1-201ENST00000440877 241 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 AC087499.7-201ENST00000441958 109 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
SNHG28P0DPA3 HSBP1P2-201ENST00000299671 229 ntBASIC1.3□□□□□ -2.2
SNHG28P0DPA3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.3□□□□□ -2.2
SNHG28P0DPA3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SNHG28P0DPA3 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
SNHG28P0DPA3 snoU13.21-201ENST00000459368 105 ntBASIC1.3□□□□□ -2.2
SNHG28P0DPA3 RNU7-153P-201ENST00000516455 62 ntBASIC1.3□□□□□ -2.2
SNHG28P0DPA3 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
SNHG28P0DPA3 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
SNHG28P0DPA3 Y_RNA.244-201ENST00000364484 109 ntBASIC1.29□□□□□ -2.2
SNHG28P0DPA3 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
SNHG28P0DPA3 RNU7-85P-201ENST00000458851 63 ntBASIC1.29□□□□□ -2.2
SNHG28P0DPA3 RNU6-322P-201ENST00000516010 103 ntBASIC1.29□□□□□ -2.2
SNHG28P0DPA3 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
SNHG28P0DPA3 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
SNHG28P0DPA3 MIR3202-2-201ENST00000635980 79 ntBASIC1.29□□□□□ -2.2
SNHG28P0DPA3 MIR96-201ENST00000362288 78 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 1293.5 ms