Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 AC138749.4-201ENST00000563970 127 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.24□□□□□ -2.21
KDM1AO60341 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 AP001362.1-201ENST00000625165 124 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 U6.109-201ENST00000636749 87 ntBASIC1.24□□□□□ -2.21
KDM1AO60341 RNU6-1313P-201ENST00000362622 102 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 RNA5SP133-201ENST00000363368 119 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 RNU6-977P-201ENST00000516411 103 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 RNU6-1018P-201ENST00000516577 106 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 MIR4498-201ENST00000577599 66 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 MIR4491-201ENST00000581087 68 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 MIR376B-201ENST00000614515 100 ntBASIC1.23□□□□□ -2.21
KDM1AO60341 RNU6-403P-201ENST00000363163 104 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 SNORD114-24-201ENST00000365029 72 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 RNU6-53P-201ENST00000365367 106 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 Y_RNA.360-201ENST00000365512 102 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 MIR605-201ENST00000385078 83 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 MIR938-201ENST00000401216 83 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 RNU6-1110P-201ENST00000516462 101 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 AL136317.1-201ENST00000612653 226 ntBASIC1.22□□□□□ -2.21
KDM1AO60341 Y_RNA.338-201ENST00000365320 114 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 SNORA22-201ENST00000383907 134 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 SNORA72.6-201ENST00000384520 129 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 MIR34C-201ENST00000384831 77 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 AL603825.1-201ENST00000438481 80 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 MIR4694-201ENST00000578534 80 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 MIR4804-201ENST00000581683 73 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 uc_338.28-201ENST00000612082 187 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 AL512310.12-203ENST00000640543 90 ntBASIC1.21□□□□□ -2.22
KDM1AO60341 Y_RNA.116-201ENST00000363292 103 ntBASIC1.2□□□□□ -2.22
KDM1AO60341 Y_RNA.163-201ENST00000363702 113 ntBASIC1.2□□□□□ -2.22
KDM1AO60341 RNU6-1201P-201ENST00000384227 107 ntBASIC1.2□□□□□ -2.22
KDM1AO60341 U7.7-201ENST00000459276 60 ntBASIC1.2□□□□□ -2.22
KDM1AO60341 RNU7-156P-201ENST00000517214 74 ntBASIC1.2□□□□□ -2.22
KDM1AO60341 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
KDM1AO60341 MIR8066-201ENST00000617280 78 ntBASIC1.2□□□□□ -2.22
KDM1AO60341 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KDM1AO60341 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KDM1AO60341 RNU6-755P-201ENST00000364400 103 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KDM1AO60341 RNU6-364P-201ENST00000384387 107 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 MIR520F-201ENST00000384824 87 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 SNORD89-201ENST00000390981 114 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 MIR1302-5-201ENST00000408164 150 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.19□□□□□ -2.22
KDM1AO60341 SNORA25.16-201ENST00000516741 121 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 DEFB131E-201ENST00000532329 154 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 SNORD92-201ENST00000585078 85 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 MIR6082-201ENST00000613604 109 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 RMST_2.1-201ENST00000617263 136 ntBASIC1.19□□□□□ -2.22
KDM1AO60341 MIR337-201ENST00000362281 93 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 Y_RNA.13-201ENST00000362403 112 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 Y_RNA.42-201ENST00000362660 108 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 RNY3P2-201ENST00000362918 102 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 RNU4-58P-201ENST00000363192 141 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 RNY1P10-201ENST00000363268 113 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 Y_RNA.119-201ENST00000363301 96 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 Y_RNA.377-201ENST00000365644 108 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 RNU6-44P-201ENST00000384045 107 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 RNU6-106P-201ENST00000384405 107 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 MIR577-201ENST00000385196 96 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 RNU6-554P-201ENST00000410466 106 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 UBL5P1-201ENST00000507979 193 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 RNU6-765P-201ENST00000516916 99 ntBASIC1.18□□□□□ -2.22
KDM1AO60341 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
KDM1AO60341 SNORD38.2-201ENST00000384470 69 ntBASIC1.17□□□□□ -2.22
KDM1AO60341 RNU1-119P-201ENST00000391122 165 ntBASIC1.17□□□□□ -2.22
KDM1AO60341 RNU7-102P-201ENST00000458948 62 ntBASIC1.17□□□□□ -2.22
KDM1AO60341 RNU6-1053P-201ENST00000515930 101 ntBASIC1.17□□□□□ -2.22
KDM1AO60341 SNORA63.4-201ENST00000362763 126 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 RNU7-56P-201ENST00000458744 62 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 RNU6-1194P-201ENST00000516208 104 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 RNA5SP255-201ENST00000516370 107 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 RNU6-531P-201ENST00000516694 104 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 RNU6-1006P-201ENST00000516998 103 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 AC090897.1-201ENST00000580909 226 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 AL442128.1-201ENST00000615151 90 ntBASIC1.16□□□□□ -2.22
KDM1AO60341 RNU6-832P-201ENST00000363319 107 ntBASIC1.15□□□□□ -2.23
KDM1AO60341 SNORD38.1-201ENST00000363863 68 ntBASIC1.15□□□□□ -2.23
KDM1AO60341 PDCD5P2-201ENST00000507570 312 ntBASIC1.15□□□□□ -2.23
KDM1AO60341 TRMT112P2-201ENST00000512910 132 ntBASIC1.15□□□□□ -2.23
KDM1AO60341 AC141557.1-201ENST00000540982 400 ntBASIC1.15□□□□□ -2.23
KDM1AO60341 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
KDM1AO60341 HSBP1P2-201ENST00000299671 229 ntBASIC1.14□□□□□ -2.23
KDM1AO60341 RNU6-1099P-201ENST00000363533 107 ntBASIC1.14□□□□□ -2.23
KDM1AO60341 RNU4-36P-201ENST00000364294 144 ntBASIC1.14□□□□□ -2.23
KDM1AO60341 MIR520H-201ENST00000385126 88 ntBASIC1.14□□□□□ -2.23
KDM1AO60341 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
KDM1AO60341 AP003327.1-201ENST00000529684 127 ntBASIC1.14□□□□□ -2.23
KDM1AO60341 Y_RNA.78-201ENST00000362970 110 ntBASIC1.13□□□□□ -2.23
KDM1AO60341 Y_RNA.81-201ENST00000362997 102 ntBASIC1.13□□□□□ -2.23
KDM1AO60341 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
KDM1AO60341 AL031737.1-201ENST00000450125 223 ntBASIC1.13□□□□□ -2.23
KDM1AO60341 MIR4500-201ENST00000579472 76 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms