Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 Y_RNA.648-201ENST00000459455 110 ntBASIC1.86□□□□□ -2.11
PRICKLE3O43900 AC090897.1-201ENST00000580909 226 ntBASIC1.86□□□□□ -2.11
PRICKLE3O43900 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.86□□□□□ -2.11
PRICKLE3O43900 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
PRICKLE3O43900 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
PRICKLE3O43900 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
PRICKLE3O43900 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 SNORA63.2-201ENST00000362603 126 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNU6-686P-201ENST00000364839 107 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNA5SP237-201ENST00000410414 113 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNU6-321P-201ENST00000410912 106 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 AC244023.1-201ENST00000426884 112 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNU6-850P-201ENST00000516934 103 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 AC138749.4-201ENST00000563970 127 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
PRICKLE3O43900 AC242498.1-201ENST00000604134 111 ntBASIC1.85□□□□□ -2.11
PRICKLE3O43900 RNU6-571P-201ENST00000384128 107 ntBASIC1.84□□□□□ -2.11
PRICKLE3O43900 MIR489-201ENST00000384923 84 ntBASIC1.84□□□□□ -2.11
PRICKLE3O43900 snoU13.2-201ENST00000459201 104 ntBASIC1.84□□□□□ -2.11
PRICKLE3O43900 RNU7-41P-201ENST00000515917 61 ntBASIC1.84□□□□□ -2.11
PRICKLE3O43900 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
PRICKLE3O43900 SNORA31.17-201ENST00000516953 127 ntBASIC1.84□□□□□ -2.11
PRICKLE3O43900 MIR8070-201ENST00000616510 88 ntBASIC1.84□□□□□ -2.11
PRICKLE3O43900 AC008163.1-202ENST00000636004 2889 ntBASIC1.84□□□□□ -2.12
PRICKLE3O43900 MIR194-1-201ENST00000384892 85 ntBASIC1.83□□□□□ -2.12
PRICKLE3O43900 MIR563-201ENST00000385080 79 ntBASIC1.83□□□□□ -2.12
PRICKLE3O43900 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PRICKLE3O43900 AC027119.1-201ENST00000440877 241 ntBASIC1.83□□□□□ -2.12
PRICKLE3O43900 AC009474.2-201ENST00000451383 136 ntBASIC1.83□□□□□ -2.12
PRICKLE3O43900 RNU6-539P-201ENST00000516665 103 ntBASIC1.83□□□□□ -2.12
PRICKLE3O43900 MIR4796-201ENST00000580742 81 ntBASIC1.83□□□□□ -2.12
PRICKLE3O43900 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
PRICKLE3O43900 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
PRICKLE3O43900 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRICKLE3O43900 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRICKLE3O43900 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 RNU6-380P-201ENST00000410207 107 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 SCARNA18B-201ENST00000458806 135 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 AC005908.1-201ENST00000468701 347 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 AC079804.2-201ENST00000490376 200 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 Y_RNA.660-201ENST00000516002 120 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 MIR3134-201ENST00000579433 74 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 MIR4500-201ENST00000579472 76 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 PRELID3BP2-201ENST00000605362 201 ntBASIC1.82□□□□□ -2.12
PRICKLE3O43900 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
PRICKLE3O43900 RNU6-203P-201ENST00000384038 104 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 MIR518E-201ENST00000385252 88 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
PRICKLE3O43900 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 HMGN2P38-201ENST00000423806 265 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 FGF7P7-201ENST00000514120 227 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 MIR4448-201ENST00000584360 86 ntBASIC1.81□□□□□ -2.12
PRICKLE3O43900 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
PRICKLE3O43900 RNA5SP48-201ENST00000363969 126 ntBASIC1.8□□□□□ -2.12
PRICKLE3O43900 RNU6-411P-201ENST00000384451 107 ntBASIC1.8□□□□□ -2.12
PRICKLE3O43900 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PRICKLE3O43900 AC004965.1-201ENST00000413033 213 ntBASIC1.8□□□□□ -2.12
PRICKLE3O43900 TRMT112P2-201ENST00000512910 132 ntBASIC1.8□□□□□ -2.12
PRICKLE3O43900 RNU6-322P-201ENST00000516010 103 ntBASIC1.8□□□□□ -2.12
PRICKLE3O43900 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.8□□□□□ -2.12
PRICKLE3O43900 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PRICKLE3O43900 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
PRICKLE3O43900 SNORD36A-201ENST00000362874 73 ntBASIC1.79□□□□□ -2.12
PRICKLE3O43900 Y_RNA.119-201ENST00000363301 96 ntBASIC1.79□□□□□ -2.12
PRICKLE3O43900 MIR588-201ENST00000384900 83 ntBASIC1.79□□□□□ -2.12
PRICKLE3O43900 MIR520H-201ENST00000385126 88 ntBASIC1.79□□□□□ -2.12
PRICKLE3O43900 MIR1302-7-201ENST00000408841 72 ntBASIC1.79□□□□□ -2.12
PRICKLE3O43900 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
PRICKLE3O43900 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.79□□□□□ -2.12
PRICKLE3O43900 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
PRICKLE3O43900 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PRICKLE3O43900 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PRICKLE3O43900 MIR30D-201ENST00000362283 70 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 RNU6-161P-201ENST00000363051 106 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 RNU6-811P-201ENST00000384069 107 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 SNORA72.6-201ENST00000384520 129 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PRICKLE3O43900 RNA5SP292-201ENST00000390974 118 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 RNU6-75P-201ENST00000515944 104 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 SNORA18.5-201ENST00000516616 101 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 MIR4536-1-201ENST00000583537 88 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 U6.109-201ENST00000636749 87 ntBASIC1.78□□□□□ -2.12
PRICKLE3O43900 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRICKLE3O43900 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PRICKLE3O43900 Y_RNA.532-201ENST00000384590 113 ntBASIC1.77□□□□□ -2.13
PRICKLE3O43900 BX276092.1-201ENST00000427368 251 ntBASIC1.77□□□□□ -2.13
PRICKLE3O43900 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.77□□□□□ -2.13
PRICKLE3O43900 SNORA4-201ENST00000584302 138 ntBASIC1.77□□□□□ -2.13
PRICKLE3O43900 AL357312.1-201ENST00000603879 298 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms