Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 RNU6-355P-201ENST00000410427 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 RNU6-791P-201ENST00000410467 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 RNU6-705P-201ENST00000410601 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 RNU6-1100P-201ENST00000410691 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 RNU6-860P-201ENST00000410860 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 RNU6-1217P-201ENST00000411276 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 RNU6-785P-201ENST00000411324 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 RNU6-531P-201ENST00000516694 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 AC015712.3-201ENST00000559380 164 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.84□□□□□ -2.27
ITM2AO43736 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.84□□□□□ -2.27
ITM2AO43736 AL136317.1-201ENST00000612653 226 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 U6.90-201ENST00000614007 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 U6.70-201ENST00000620287 104 ntBASIC0.84□□□□□ -2.27
ITM2AO43736 Y_RNA.98-201ENST00000363109 102 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 U8.6-201ENST00000364939 135 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 SNORA72.6-201ENST00000384520 129 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 MIR23A-201ENST00000385245 73 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 Y_RNA.629-201ENST00000411368 105 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.83□□□□□ -2.28
ITM2AO43736 RNU6-589P-201ENST00000516485 107 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 RNU6-1006P-201ENST00000516998 103 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 AC068339.1-201ENST00000526965 141 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 AL353997.5-201ENST00000618886 171 ntBASIC0.83□□□□□ -2.28
ITM2AO43736 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
ITM2AO43736 Y_RNA.116-201ENST00000363292 103 ntBASIC0.82□□□□□ -2.28
ITM2AO43736 Y_RNA.247-201ENST00000364500 92 ntBASIC0.82□□□□□ -2.28
ITM2AO43736 RNU1-119P-201ENST00000391122 165 ntBASIC0.82□□□□□ -2.28
ITM2AO43736 SNORD99-201ENST00000408612 74 ntBASIC0.82□□□□□ -2.28
ITM2AO43736 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.82□□□□□ -2.28
ITM2AO43736 AC090897.1-201ENST00000580909 226 ntBASIC0.82□□□□□ -2.28
ITM2AO43736 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
ITM2AO43736 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
ITM2AO43736 RNU6-1313P-201ENST00000362622 102 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 Y_RNA.155-201ENST00000363632 101 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 RNA5SP99-201ENST00000364020 114 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 Y_RNA.309-201ENST00000365046 111 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 Y_RNA.323-201ENST00000365157 109 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 Y_RNA.360-201ENST00000365512 102 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 RNU6-409P-201ENST00000384114 104 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 snoU13.23-201ENST00000458863 104 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 AC108210.2-201ENST00000503681 201 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 RNU6-765P-201ENST00000516916 99 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 MIR5009-201ENST00000578736 100 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
ITM2AO43736 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 AP001362.1-201ENST00000625165 124 ntBASIC0.81□□□□□ -2.28
ITM2AO43736 MIR378A-201ENST00000362177 66 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 RNU6-865P-201ENST00000364772 107 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 RNU6-1325P-201ENST00000364905 105 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 Y_RNA.507-201ENST00000384500 99 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 MIR1912-201ENST00000410389 80 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 RNU6-733P-201ENST00000410759 104 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 AC244098.3-201ENST00000424803 96 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 MIR4500-201ENST00000579472 76 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 MIR3613-201ENST00000579844 87 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 MIR548AI-201ENST00000579940 88 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 AL359821.1-201ENST00000605519 182 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.8□□□□□ -2.28
ITM2AO43736 RNU6-1107P-201ENST00000364817 104 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 RNU6-1201P-201ENST00000384227 107 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 SNORD20-201ENST00000384550 80 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 MIR573-201ENST00000384964 99 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 MIR577-201ENST00000385196 96 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.79□□□□□ -2.28
ITM2AO43736 RNU6-1018P-201ENST00000516577 106 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 Y_RNA.709-201ENST00000516952 92 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 DEFB131E-201ENST00000532329 154 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 AL512310.12-203ENST00000640543 90 ntBASIC0.79□□□□□ -2.28
ITM2AO43736 RNU4-58P-201ENST00000363192 141 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 RNU6-215P-201ENST00000365169 102 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 RNU6-1014P-201ENST00000383940 103 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 RNY4P18-201ENST00000391107 89 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 AC002350.1-201ENST00000490759 375 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 AC108729.3-201ENST00000513484 108 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 RNU6-448P-201ENST00000517052 107 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 AC011195.1-201ENST00000578177 177 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
ITM2AO43736 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.78□□□□□ -2.28
ITM2AO43736 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ITM2AO43736 RNU6-291P-201ENST00000384720 107 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 SNORD100-201ENST00000408573 76 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 BX276092.1-201ENST00000427368 251 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 RNU6-1194P-201ENST00000516208 104 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 AP003327.1-201ENST00000529684 127 ntBASIC0.77□□□□□ -2.29
ITM2AO43736 Y_RNA.49-201ENST00000362714 112 ntBASIC0.76□□□□□ -2.29
ITM2AO43736 RNU6-1099P-201ENST00000363533 107 ntBASIC0.76□□□□□ -2.29
ITM2AO43736 RNA5SP245-201ENST00000364239 121 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms