Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SRGAP3O43295 MIR103A2-201ENST00000362154 78 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 RNU6-219P-201ENST00000364728 107 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 Y_RNA.609-201ENST00000410669 89 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.78□□□□□ -2.12
SRGAP3O43295 snoU13.25-201ENST00000458945 104 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 RNU7-95P-201ENST00000459222 64 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 AC090897.1-201ENST00000580909 226 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 SNORA4-201ENST00000584302 138 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 U6.109-201ENST00000636749 87 ntBASIC1.78□□□□□ -2.12
SRGAP3O43295 RNU6-997P-201ENST00000384725 107 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 SNORD78.1-201ENST00000390866 65 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 RNU6-1275P-201ENST00000391087 107 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 RNU6-1165P-201ENST00000410119 107 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 Y_RNA.620-201ENST00000411009 88 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 AP1B1P2-201ENST00000416196 106 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.77□□□□□ -2.13
SRGAP3O43295 Y_RNA.168-201ENST00000363740 102 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 Y_RNA.173-201ENST00000363776 113 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 Y_RNA.191-201ENST00000363972 113 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 RNY1P2-201ENST00000364820 117 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 RNU6-1276P-201ENST00000365372 104 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 RNU6-1124P-201ENST00000384169 107 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 MIR181B2-201ENST00000385004 89 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 MIR563-201ENST00000385080 79 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 RNA5SP95-201ENST00000410319 137 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 AC138749.4-201ENST00000563970 127 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 MIR4500-201ENST00000579472 76 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 MIR3937-201ENST00000580135 106 ntBASIC1.76□□□□□ -2.13
SRGAP3O43295 MIR378A-201ENST00000362177 66 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 Y_RNA.4-201ENST00000362333 112 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 MIR1185-1-201ENST00000408598 86 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 Y_RNA.611-201ENST00000410682 108 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 AC079140.2-201ENST00000506193 142 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 MIR5588-201ENST00000581890 63 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 AC020891.4-201ENST00000605745 93 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 AL627230.6-201ENST00000611129 280 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 AC025521.1-201ENST00000621624 286 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 MIR6516-201ENST00000630554 81 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 ZNF209P-201ENST00000593450 2304 ntBASIC1.75□□□□□ -2.13
SRGAP3O43295 HSBP1P2-201ENST00000299671 229 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 MIR30D-201ENST00000362283 70 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 RNA5SP133-201ENST00000363368 119 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 RNU6-1125P-201ENST00000363601 107 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 RNU6-654P-201ENST00000364373 107 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 RNU6-480P-201ENST00000384332 107 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 SNORA2B-201ENST00000384583 137 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 MT-TN-201ENST00000387400 73 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 AL133373.1-201ENST00000497098 94 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 AL513043.2-201ENST00000573941 143 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 uc_338.6-201ENST00000613544 171 ntBASIC1.74□□□□□ -2.13
SRGAP3O43295 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SRGAP3O43295 RNU6-228P-201ENST00000362700 106 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 RNA5SP264-201ENST00000363115 107 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 RNU6-1065P-201ENST00000384513 106 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 SNORA44.1-201ENST00000517031 108 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 MIR3202-2-201ENST00000635980 79 ntBASIC1.73□□□□□ -2.13
SRGAP3O43295 MIR302D-201ENST00000362275 68 ntBASIC1.72□□□□□ -2.13
SRGAP3O43295 RNU6-979P-201ENST00000383896 107 ntBASIC1.72□□□□□ -2.13
SRGAP3O43295 RNA5SP225-201ENST00000410874 135 ntBASIC1.72□□□□□ -2.13
SRGAP3O43295 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
SRGAP3O43295 RNU6-638P-201ENST00000516582 104 ntBASIC1.72□□□□□ -2.13
SRGAP3O43295 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
SRGAP3O43295 Y_RNA.119-201ENST00000363301 96 ntBASIC1.71□□□□□ -2.14
SRGAP3O43295 MT-TF-201ENST00000387314 71 ntBASIC1.71□□□□□ -2.14
SRGAP3O43295 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SRGAP3O43295 RNA5SP247-201ENST00000411181 105 ntBASIC1.71□□□□□ -2.14
SRGAP3O43295 BX276092.1-201ENST00000427368 251 ntBASIC1.71□□□□□ -2.14
SRGAP3O43295 RPL30P7-201ENST00000479312 323 ntBASIC1.71□□□□□ -2.14
SRGAP3O43295 Y_RNA.685-201ENST00000516532 108 ntBASIC1.71□□□□□ -2.14
SRGAP3O43295 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.71□□□□□ -2.14
SRGAP3O43295 Y_RNA.57-201ENST00000362806 113 ntBASIC1.7□□□□□ -2.14
SRGAP3O43295 RNU6-509P-201ENST00000363519 107 ntBASIC1.7□□□□□ -2.14
SRGAP3O43295 RNU6-613P-201ENST00000410412 108 ntBASIC1.7□□□□□ -2.14
SRGAP3O43295 RNU6-1053P-201ENST00000515930 101 ntBASIC1.7□□□□□ -2.14
SRGAP3O43295 RNU11-2P-201ENST00000516898 142 ntBASIC1.7□□□□□ -2.14
SRGAP3O43295 AP003716.2-201ENST00000528260 108 ntBASIC1.7□□□□□ -2.14
SRGAP3O43295 MIR548BB-201ENST00000626714 66 ntBASIC1.7□□□□□ -2.14
SRGAP3O43295 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SRGAP3O43295 MIR377-201ENST00000362145 69 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 SNORD33-201ENST00000362761 85 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 Y_RNA.426-201ENST00000384068 113 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 Y_RNA.437-201ENST00000384113 113 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SRGAP3O43295 MIR1255A-201ENST00000408338 113 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 RNU4-83P-201ENST00000410863 133 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 SNRPGP12-201ENST00000449481 213 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 RNU6-850P-201ENST00000516934 103 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 MIR4498-201ENST00000577599 66 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 MIR8066-201ENST00000617280 78 ntBASIC1.69□□□□□ -2.14
SRGAP3O43295 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SRGAP3O43295 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 281.1 ms