Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR4421-201ENST00000578133 69 ntBASIC1.98□□□□□ -2.09
TMEM88BA6NKF7 MIR4439-201ENST00000583746 80 ntBASIC1.98□□□□□ -2.09
TMEM88BA6NKF7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TMEM88BA6NKF7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TMEM88BA6NKF7 MIR222-201ENST00000384992 110 ntBASIC1.97□□□□□ -2.09
TMEM88BA6NKF7 SNORA75.2-201ENST00000391138 150 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORA75.3-201ENST00000391231 150 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORD93-201ENST00000408813 74 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORA19.1-201ENST00000410656 129 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 RNU7-21P-201ENST00000459430 62 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 RNU1-92P-201ENST00000517017 135 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 ZNF209P-201ENST00000593450 2304 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 SNORA67.6-201ENST00000391093 99 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 MIR1257-201ENST00000408490 117 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 AC106800.4-201ENST00000614905 153 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 MIR34C-201ENST00000384831 77 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 RNU6-994P-201ENST00000410507 111 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 AC004941.2-201ENST00000427009 228 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 AL353813.1-201ENST00000440700 253 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 SNORD79.1-201ENST00000516069 84 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 AC036111.3-201ENST00000526389 112 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 MTND5P40-201ENST00000559945 246 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 MIR376B-201ENST00000614515 100 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 RNU6-934P-201ENST00000365154 107 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 MIR598-201ENST00000384868 97 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 U8.15-201ENST00000390947 134 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 AC067940.1-201ENST00000458411 300 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 RNU6-90P-201ENST00000606352 106 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 AL353770.2-201ENST00000620024 78 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 AC096949.1-201ENST00000412047 152 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 RNU6-109P-201ENST00000516364 107 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 RNU6-184P-201ENST00000516514 107 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 RNA5SP170-201ENST00000517150 101 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 AC023934.1-201ENST00000574529 2389 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 MIR96-201ENST00000362288 78 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 U6.109-201ENST00000636749 87 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
TMEM88BA6NKF7 RNU6-170P-201ENST00000362832 104 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.95-201ENST00000363079 95 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 RNA5SP133-201ENST00000363368 119 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.348-201ENST00000365403 103 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 MTATP8P2-201ENST00000435212 202 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 SPINT5P-201ENST00000448174 155 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 UBL5P1-201ENST00000507979 193 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 AC023827.1-201ENST00000569247 97 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 RNU4-58P-201ENST00000363192 141 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNU1-36P-201ENST00000365130 165 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 MIR548G-201ENST00000408442 89 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNU7-185P-201ENST00000459215 60 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 AC008163.1-202ENST00000636004 2889 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.705-201ENST00000516862 110 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 AC138749.4-201ENST00000563970 127 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 SNORA25-201ENST00000384384 134 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1006P-201ENST00000516998 103 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR4771-2-201ENST00000577758 74 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR4500-201ENST00000579472 76 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR4771-1-201ENST00000582617 74 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR6078-201ENST00000611069 100 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 RNU6-403P-201ENST00000363163 104 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.220-201ENST00000364244 109 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 RNU6-972P-201ENST00000391208 107 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 RNY4P30-201ENST00000410216 95 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 RNU4-83P-201ENST00000410863 133 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 SNORD83.1-201ENST00000411362 77 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 SNORA31.24-201ENST00000517232 57 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 uc_338.6-201ENST00000613544 171 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 HSBP1P2-201ENST00000299671 229 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU1-93P-201ENST00000364704 169 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU6-905P-201ENST00000384434 107 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 SNORA72.6-201ENST00000384520 129 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RPS26P5-201ENST00000418544 335 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU6-795P-201ENST00000516323 103 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms