Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR1302-1-201ENST00000637932 143 ntBASIC-0.86□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 RNU6-326P-201ENST00000365480 107 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 SNORA32-201ENST00000384072 121 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 MIR599-201ENST00000385069 95 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 MIR1265-201ENST00000408444 86 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 RNU6-721P-201ENST00000410155 105 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 FGF7P6-202ENST00000451282 293 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 RNU6-976P-201ENST00000516086 111 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 AP000676.1-201ENST00000533307 52 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 RNU7-10P-201ENST00000607194 63 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 AC098479.1-201ENST00000609225 154 ntBASIC-0.87□□□□□ -2.55
VAPAQ9P0L0 RNU1-141P-201ENST00000364623 158 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 RNU6-211P-201ENST00000384047 107 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 MIR635-201ENST00000384830 98 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 RNU7-137P-201ENST00000516788 62 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 RNU6-881P-201ENST00000516813 102 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 MIR3920-201ENST00000581751 86 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 U4.1-201ENST00000620349 87 ntBASIC-0.88□□□□□ -2.55
VAPAQ9P0L0 RNU6-901P-201ENST00000384593 106 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 MIR1302-11-201ENST00000408051 138 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 MIR1302-9-201ENST00000408365 138 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 MIR1302-10-201ENST00000408734 138 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 RNA5SP25-201ENST00000410815 110 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 SPINT5P-201ENST00000448174 155 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 AL500527.2-201ENST00000454105 95 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 RNU7-113P-201ENST00000459273 62 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 TRAJ51-201ENST00000504127 63 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 SNORD67.1-201ENST00000516618 108 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 RNA5SP33-201ENST00000516687 98 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 RNU6-453P-201ENST00000516819 85 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 AP001328.1-201ENST00000528550 176 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 YWHAEP2-201ENST00000580066 112 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 AL365205.2-201ENST00000594586 68 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 MIR1302-2-201ENST00000607096 138 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 uc_338.10-201ENST00000621872 182 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 AC090574.1-201ENST00000623186 233 ntBASIC-0.89□□□□□ -2.55
VAPAQ9P0L0 RNU6-449P-201ENST00000383914 107 ntBASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 RNU6-429P-201ENST00000384582 108 ntBASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 SNORD83B-201ENST00000386745 93 ntBASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 RNU4-63P-201ENST00000411313 118 ntBASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 snoU13.13-201ENST00000458842 104 ntBASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.9□□□□□ -2.55
VAPAQ9P0L0 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.91□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.91□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.91□□□□□ -2.56
VAPAQ9P0L0 SNORA79-201ENST00000408376 140 ntBASIC-0.91□□□□□ -2.56
VAPAQ9P0L0 AC098614.3-201ENST00000438957 440 ntBASIC-0.91□□□□□ -2.56
VAPAQ9P0L0 AC082651.2-201ENST00000496833 166 ntBASIC-0.91□□□□□ -2.56
VAPAQ9P0L0 AC021146.6-201ENST00000514659 117 ntBASIC-0.91□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 SNORA63.7-201ENST00000365579 123 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 RNU6-154P-201ENST00000384306 106 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 RNY1P7-201ENST00000384743 110 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 MIR616-201ENST00000385293 97 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 AL603914.1-201ENST00000401964 204 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 MIR548AG2-201ENST00000581228 64 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 AC006504.6-201ENST00000590142 199 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 AL359881.1-201ENST00000602916 267 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 MIR6851-201ENST00000617060 67 ntBASIC-0.92□□□□□ -2.56
VAPAQ9P0L0 MTND5P18-201ENST00000445624 1801 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 SNORD114-29-201ENST00000364819 70 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 SNORD115-44-201ENST00000365391 82 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 RNA5SP144-201ENST00000410846 116 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 AC097635.1-201ENST00000450678 155 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 SNORD19B-201ENST00000459623 84 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 AC074198.2-201ENST00000508153 258 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 SCARNA15-202ENST00000516881 127 ntBASIC-0.93□□□□□ -2.56
VAPAQ9P0L0 SNORD114-10-201ENST00000363409 72 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 MIR517B-201ENST00000385102 67 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 RNU6-121P-201ENST00000410525 99 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 RNU7-74P-201ENST00000459104 62 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 RNU6-561P-201ENST00000516222 102 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 IGKV1-22-201ENST00000524313 326 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 MIR5704-201ENST00000584029 77 ntBASIC-0.94□□□□□ -2.56
VAPAQ9P0L0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 RNU6-900P-201ENST00000384498 102 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 MIR519E-201ENST00000385075 84 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 RNU7-13P-201ENST00000516413 62 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 RNU6-570P-201ENST00000517051 105 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 MIR3179-1-201ENST00000578940 84 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms