Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-1165P-201ENST00000410119 107 ntBASIC1.98□□□□□ -2.09
SSU72Q9NP77 AL161932.1-201ENST00000437408 146 ntBASIC1.98□□□□□ -2.09
SSU72Q9NP77 SNRPGP12-201ENST00000449481 213 ntBASIC1.98□□□□□ -2.09
SSU72Q9NP77 MIR3162-201ENST00000581818 82 ntBASIC1.98□□□□□ -2.09
SSU72Q9NP77 RNU6-654P-201ENST00000364373 107 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 SNORA11.2-201ENST00000408318 127 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 AC087499.7-201ENST00000441958 109 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 MIR4500-201ENST00000579472 76 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 SNORA4-201ENST00000584302 138 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 AP000753.3-201ENST00000604083 169 ntBASIC1.97□□□□□ -2.09
SSU72Q9NP77 RNA5SP289-201ENST00000362332 137 ntBASIC1.96□□□□□ -2.1
SSU72Q9NP77 SNORD1A-201ENST00000364968 72 ntBASIC1.96□□□□□ -2.1
SSU72Q9NP77 RNU6-524P-201ENST00000384270 107 ntBASIC1.96□□□□□ -2.1
SSU72Q9NP77 RNU6-480P-201ENST00000384332 107 ntBASIC1.96□□□□□ -2.1
SSU72Q9NP77 MIR2115-201ENST00000516657 100 ntBASIC1.96□□□□□ -2.1
SSU72Q9NP77 MIR4287-201ENST00000579398 78 ntBASIC1.96□□□□□ -2.1
SSU72Q9NP77 U6.109-201ENST00000636749 87 ntBASIC1.96□□□□□ -2.1
SSU72Q9NP77 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
SSU72Q9NP77 AC008163.1-202ENST00000636004 2889 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 RNA5SP264-201ENST00000363115 107 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 RNU6-580P-201ENST00000365159 107 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 RNA5SP95-201ENST00000410319 137 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 RNU7-62P-201ENST00000458856 62 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 RPL30P7-201ENST00000479312 323 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 RNU6-165P-201ENST00000517170 99 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
SSU72Q9NP77 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SSU72Q9NP77 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSU72Q9NP77 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSU72Q9NP77 Y_RNA.119-201ENST00000363301 96 ntBASIC1.94□□□□□ -2.1
SSU72Q9NP77 RNU11-2P-201ENST00000516898 142 ntBASIC1.94□□□□□ -2.1
SSU72Q9NP77 RNU6-850P-201ENST00000516934 103 ntBASIC1.94□□□□□ -2.1
SSU72Q9NP77 MIR4435-1-201ENST00000582552 80 ntBASIC1.94□□□□□ -2.1
SSU72Q9NP77 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
SSU72Q9NP77 MIR8063-201ENST00000621930 81 ntBASIC1.94□□□□□ -2.1
SSU72Q9NP77 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSU72Q9NP77 Y_RNA.244-201ENST00000364484 109 ntBASIC1.93□□□□□ -2.1
SSU72Q9NP77 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
SSU72Q9NP77 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
SSU72Q9NP77 BX276092.1-201ENST00000427368 251 ntBASIC1.93□□□□□ -2.1
SSU72Q9NP77 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.93□□□□□ -2.1
SSU72Q9NP77 RNU6-857P-201ENST00000515893 110 ntBASIC1.93□□□□□ -2.1
SSU72Q9NP77 MIR377-201ENST00000362145 69 ntBASIC1.92□□□□□ -2.1
SSU72Q9NP77 RNU6-652P-201ENST00000365488 107 ntBASIC1.92□□□□□ -2.1
SSU72Q9NP77 Y_RNA.607-201ENST00000410597 98 ntBASIC1.92□□□□□ -2.1
SSU72Q9NP77 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
SSU72Q9NP77 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.92□□□□□ -2.1
SSU72Q9NP77 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.92□□□□□ -2.1
SSU72Q9NP77 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SSU72Q9NP77 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SSU72Q9NP77 MIR103A2-201ENST00000362154 78 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SSU72Q9NP77 Y_RNA.588-201ENST00000391254 102 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 RNU7-85P-201ENST00000458851 63 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 SNORD4B-201ENST00000459083 72 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 AC019176.1-201ENST00000518519 225 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 MIR3664-201ENST00000579074 99 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 MIR8066-201ENST00000617280 78 ntBASIC1.91□□□□□ -2.1
SSU72Q9NP77 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.91□□□□□ -2.1
SSU72Q9NP77 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSU72Q9NP77 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SSU72Q9NP77 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SSU72Q9NP77 Y_RNA.316-201ENST00000365118 111 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 RNU6-571P-201ENST00000384128 107 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 MT-TF-201ENST00000387314 71 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 U8.13-201ENST00000390842 128 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.9□□□□□ -2.11
SSU72Q9NP77 snoU13.9-201ENST00000458927 103 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.9□□□□□ -2.11
SSU72Q9NP77 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
SSU72Q9NP77 MIR4491-201ENST00000581087 68 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 MIR4672-201ENST00000583126 81 ntBASIC1.9□□□□□ -2.11
SSU72Q9NP77 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SSU72Q9NP77 Y_RNA.57-201ENST00000362806 113 ntBASIC1.89□□□□□ -2.11
SSU72Q9NP77 Y_RNA.94-201ENST00000363068 106 ntBASIC1.89□□□□□ -2.11
SSU72Q9NP77 RNU4-53P-201ENST00000410828 140 ntBASIC1.89□□□□□ -2.11
SSU72Q9NP77 RPL23AP94-201ENST00000512518 302 ntBASIC1.89□□□□□ -2.11
SSU72Q9NP77 RNU7-153P-201ENST00000516455 62 ntBASIC1.89□□□□□ -2.11
SSU72Q9NP77 SNORA25.16-201ENST00000516741 121 ntBASIC1.89□□□□□ -2.11
SSU72Q9NP77 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
SSU72Q9NP77 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSU72Q9NP77 MIR519C-201ENST00000385053 87 ntBASIC1.88□□□□□ -2.11
SSU72Q9NP77 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
SSU72Q9NP77 snoU13.21-201ENST00000459368 105 ntBASIC1.88□□□□□ -2.11
SSU72Q9NP77 AC079140.2-201ENST00000506193 142 ntBASIC1.88□□□□□ -2.11
SSU72Q9NP77 AC140658.3-201ENST00000567603 271 ntBASIC1.88□□□□□ -2.11
SSU72Q9NP77 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
SSU72Q9NP77 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
SSU72Q9NP77 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSU72Q9NP77 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
SSU72Q9NP77 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSU72Q9NP77 Y_RNA.221-201ENST00000364248 96 ntBASIC1.87□□□□□ -2.11
SSU72Q9NP77 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 276.6 ms