Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 RNU7-137P-201ENST00000516788 62 ntBASIC0.9□□□□□ -2.27
Q9N2J8 RNU7-6P-201ENST00000516845 62 ntBASIC0.9□□□□□ -2.27
Q9N2J8 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
Q9N2J8 RMST_2.1-201ENST00000617263 136 ntBASIC0.9□□□□□ -2.27
Q9N2J8 AC132825.6-201ENST00000638861 357 ntBASIC0.9□□□□□ -2.27
Q9N2J8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Q9N2J8 AL589743.1-201ENST00000551932 2712 ntBASIC0.9□□□□□ -2.27
Q9N2J8 RNU1-119P-201ENST00000391122 165 ntBASIC0.89□□□□□ -2.27
Q9N2J8 RNU4-83P-201ENST00000410863 133 ntBASIC0.89□□□□□ -2.27
Q9N2J8 MIR1270-201ENST00000459320 83 ntBASIC0.89□□□□□ -2.27
Q9N2J8 RNU6-659P-201ENST00000516454 104 ntBASIC0.89□□□□□ -2.27
Q9N2J8 Y_RNA.712-201ENST00000517011 92 ntBASIC0.89□□□□□ -2.27
Q9N2J8 RNU7-156P-201ENST00000517214 74 ntBASIC0.89□□□□□ -2.27
Q9N2J8 MT-TI-201ENST00000387365 69 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-447P-201ENST00000410293 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-355P-201ENST00000410427 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-791P-201ENST00000410467 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-705P-201ENST00000410601 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-860P-201ENST00000410860 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU6-785P-201ENST00000411324 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 RNU7-56P-201ENST00000458744 62 ntBASIC0.88□□□□□ -2.27
Q9N2J8 SNORD92-201ENST00000585078 85 ntBASIC0.88□□□□□ -2.27
Q9N2J8 U6.90-201ENST00000614007 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 U6.70-201ENST00000620287 104 ntBASIC0.88□□□□□ -2.27
Q9N2J8 MIR3914-2-201ENST00000637339 95 ntBASIC0.88□□□□□ -2.27
Q9N2J8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Q9N2J8 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
Q9N2J8 RNU6-403P-201ENST00000363163 104 ntBASIC0.87□□□□□ -2.27
Q9N2J8 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
Q9N2J8 Y_RNA.127-201ENST00000363386 109 ntBASIC0.87□□□□□ -2.27
Q9N2J8 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
Q9N2J8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.87□□□□□ -2.27
Q9N2J8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Q9N2J8 Y_RNA.630-201ENST00000411370 108 ntBASIC0.87□□□□□ -2.27
Q9N2J8 AC008267.6-201ENST00000441664 139 ntBASIC0.87□□□□□ -2.27
Q9N2J8 AC133485.1-201ENST00000567176 124 ntBASIC0.87□□□□□ -2.27
Q9N2J8 AL359881.1-201ENST00000602916 267 ntBASIC0.87□□□□□ -2.27
Q9N2J8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.87□□□□□ -2.27
Q9N2J8 U6.95-201ENST00000636931 70 ntBASIC0.87□□□□□ -2.27
Q9N2J8 RNY4P6-201ENST00000363667 96 ntBASIC0.86□□□□□ -2.27
Q9N2J8 Y_RNA.525-201ENST00000384570 113 ntBASIC0.86□□□□□ -2.27
Q9N2J8 MIR520H-201ENST00000385126 88 ntBASIC0.86□□□□□ -2.27
Q9N2J8 Y_RNA.588-201ENST00000391254 102 ntBASIC0.86□□□□□ -2.27
Q9N2J8 RNU4-61P-201ENST00000411243 107 ntBASIC0.86□□□□□ -2.27
Q9N2J8 AC096949.1-201ENST00000412047 152 ntBASIC0.86□□□□□ -2.27
Q9N2J8 RNU7-102P-201ENST00000458948 62 ntBASIC0.86□□□□□ -2.27
Q9N2J8 RNU6-1333P-201ENST00000516162 93 ntBASIC0.86□□□□□ -2.27
Q9N2J8 RNU6-789P-201ENST00000517105 102 ntBASIC0.86□□□□□ -2.27
Q9N2J8 MIR4491-201ENST00000581087 68 ntBASIC0.86□□□□□ -2.27
Q9N2J8 AC087741.2-201ENST00000619415 172 ntBASIC0.86□□□□□ -2.27
Q9N2J8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
Q9N2J8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Q9N2J8 RNU6-616P-201ENST00000384353 107 ntBASIC0.85□□□□□ -2.27
Q9N2J8 RNU6-1117P-201ENST00000384525 104 ntBASIC0.85□□□□□ -2.27
Q9N2J8 MIR206-201ENST00000384872 86 ntBASIC0.85□□□□□ -2.27
Q9N2J8 MIR548D2-201ENST00000384955 97 ntBASIC0.85□□□□□ -2.27
Q9N2J8 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
Q9N2J8 SNORD99-201ENST00000408612 74 ntBASIC0.85□□□□□ -2.27
Q9N2J8 AL353765.1-201ENST00000605514 183 ntBASIC0.85□□□□□ -2.27
Q9N2J8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
Q9N2J8 SNORA72.6-201ENST00000384520 129 ntBASIC0.84□□□□□ -2.27
Q9N2J8 RNU6-735P-201ENST00000410612 107 ntBASIC0.84□□□□□ -2.27
Q9N2J8 RNU7-2P-201ENST00000516096 62 ntBASIC0.84□□□□□ -2.27
Q9N2J8 RNU6-765P-201ENST00000516916 99 ntBASIC0.84□□□□□ -2.27
Q9N2J8 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
Q9N2J8 MIR6082-201ENST00000613604 109 ntBASIC0.84□□□□□ -2.27
Q9N2J8 MIR8066-201ENST00000617280 78 ntBASIC0.84□□□□□ -2.27
Q9N2J8 AC105081.1-201ENST00000617727 106 ntBASIC0.84□□□□□ -2.27
Q9N2J8 RNU6-62P-201ENST00000516526 102 ntBASIC0.83□□□□□ -2.28
Q9N2J8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.83□□□□□ -2.28
Q9N2J8 U6.109-201ENST00000636749 87 ntBASIC0.83□□□□□ -2.28
Q9N2J8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.82□□□□□ -2.28
Q9N2J8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.82□□□□□ -2.28
Q9N2J8 RNA5SP133-201ENST00000363368 119 ntBASIC0.82□□□□□ -2.28
Q9N2J8 RNY1P2-201ENST00000364820 117 ntBASIC0.82□□□□□ -2.28
Q9N2J8 SNORD115-35-201ENST00000365122 82 ntBASIC0.82□□□□□ -2.28
Q9N2J8 Y_RNA.448-201ENST00000384185 108 ntBASIC0.82□□□□□ -2.28
Q9N2J8 MIR608-201ENST00000384820 100 ntBASIC0.82□□□□□ -2.28
Q9N2J8 MIR573-201ENST00000384964 99 ntBASIC0.82□□□□□ -2.28
Q9N2J8 RNU6-1321P-201ENST00000390905 107 ntBASIC0.82□□□□□ -2.28
Q9N2J8 RNU7-48P-201ENST00000458875 63 ntBASIC0.82□□□□□ -2.28
Q9N2J8 Y_RNA.649-201ENST00000459077 103 ntBASIC0.82□□□□□ -2.28
Q9N2J8 Y_RNA.676-201ENST00000516393 96 ntBASIC0.82□□□□□ -2.28
Q9N2J8 DEFB131E-201ENST00000532329 154 ntBASIC0.82□□□□□ -2.28
Q9N2J8 AC090897.1-201ENST00000580909 226 ntBASIC0.82□□□□□ -2.28
Q9N2J8 AC008608.1-201ENST00000603910 127 ntBASIC0.82□□□□□ -2.28
Q9N2J8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
Q9N2J8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.81□□□□□ -2.28
Q9N2J8 RNU4-58P-201ENST00000363192 141 ntBASIC0.81□□□□□ -2.28
Q9N2J8 SNORD114-27-201ENST00000363766 70 ntBASIC0.81□□□□□ -2.28
Q9N2J8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Q9N2J8 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
Q9N2J8 SNORD33.1-201ENST00000516213 88 ntBASIC0.81□□□□□ -2.28
Q9N2J8 SNORA25.16-201ENST00000516741 121 ntBASIC0.81□□□□□ -2.28
Q9N2J8 AP003327.1-201ENST00000529684 127 ntBASIC0.81□□□□□ -2.28
Q9N2J8 AC138749.4-201ENST00000563970 127 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 263.1 ms