Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC079804.2-201ENST00000490376 200 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 RPS29P11-201ENST00000496507 171 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 AC079140.2-201ENST00000506193 142 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 MIR2115-201ENST00000516657 100 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 RNA5SP364-201ENST00000516938 78 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 MIR5588-201ENST00000581890 63 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 PRELID3BP2-201ENST00000605362 201 ntBASIC2.11□□□□□ -2.07
TRIM56Q9BRZ2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 Y_RNA.173-201ENST00000363776 113 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-1124P-201ENST00000384169 107 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 RNY1P4-201ENST00000384595 115 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 MIR588-201ENST00000384900 83 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 AC244023.1-201ENST00000426884 112 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 RNA5SP445-201ENST00000515889 115 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 AC242498.1-201ENST00000604134 111 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 MIR8063-201ENST00000621930 81 ntBASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRIM56Q9BRZ2 HSBP1P2-201ENST00000299671 229 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 RNA5SP99-201ENST00000364020 114 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 RNU6-979P-201ENST00000383896 107 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 MT-TN-201ENST00000387400 73 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 RNU11-2P-201ENST00000516898 142 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 AP000942.3-201ENST00000603702 160 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 MIR6873-201ENST00000622788 63 ntBASIC2.09□□□□□ -2.07
TRIM56Q9BRZ2 SNORD1A-201ENST00000364968 72 ntBASIC2.08□□□□□ -2.08
TRIM56Q9BRZ2 Y_RNA.426-201ENST00000384068 113 ntBASIC2.08□□□□□ -2.08
TRIM56Q9BRZ2 RNU1-98P-201ENST00000458992 160 ntBASIC2.08□□□□□ -2.08
TRIM56Q9BRZ2 AL133373.1-201ENST00000497098 94 ntBASIC2.08□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-267P-201ENST00000516714 103 ntBASIC2.08□□□□□ -2.08
TRIM56Q9BRZ2 SNORA4-201ENST00000584302 138 ntBASIC2.08□□□□□ -2.08
TRIM56Q9BRZ2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
TRIM56Q9BRZ2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-228P-201ENST00000362700 106 ntBASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 MIR563-201ENST00000385080 79 ntBASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 Y_RNA.609-201ENST00000410669 89 ntBASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 RNU7-171P-201ENST00000459581 62 ntBASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-947P-201ENST00000516264 106 ntBASIC2.07□□□□□ -2.08
TRIM56Q9BRZ2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 SNORA25.3-201ENST00000363205 127 ntBASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 Y_RNA.168-201ENST00000363740 102 ntBASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-482P-201ENST00000391068 107 ntBASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 MIR1302-7-201ENST00000408841 72 ntBASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 AC008834.1-201ENST00000511612 175 ntBASIC2.06□□□□□ -2.08
TRIM56Q9BRZ2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 AL161932.1-201ENST00000437408 146 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 AL603825.1-201ENST00000438481 80 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 AC245517.4-201ENST00000448601 281 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 RNU7-62P-201ENST00000458856 62 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 AL513043.2-201ENST00000573941 143 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 MIR4422-201ENST00000581938 83 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-633P-201ENST00000362612 103 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-509P-201ENST00000363519 107 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 SNORA2B-201ENST00000384583 137 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 MIR181B2-201ENST00000385004 89 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 MT-TF-201ENST00000387314 71 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-1165P-201ENST00000410119 107 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 Y_RNA.611-201ENST00000410682 108 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 AC005908.1-201ENST00000468701 347 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 RNU6-548P-201ENST00000517083 115 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 AC090897.1-201ENST00000580909 226 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 MIR6740-201ENST00000618268 113 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 MIR219B-201ENST00000637023 88 ntBASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRIM56Q9BRZ2 MIR377-201ENST00000362145 69 ntBASIC2.03□□□□□ -2.08
TRIM56Q9BRZ2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRIM56Q9BRZ2 RNU1-78P-201ENST00000391248 165 ntBASIC2.03□□□□□ -2.08
TRIM56Q9BRZ2 MIR4666B-201ENST00000578142 81 ntBASIC2.03□□□□□ -2.08
TRIM56Q9BRZ2 MIR3937-201ENST00000580135 106 ntBASIC2.03□□□□□ -2.08
TRIM56Q9BRZ2 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
TRIM56Q9BRZ2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM56Q9BRZ2 MIR103A2-201ENST00000362154 78 ntBASIC2.02□□□□□ -2.09
TRIM56Q9BRZ2 Y_RNA.4-201ENST00000362333 112 ntBASIC2.02□□□□□ -2.09
TRIM56Q9BRZ2 RNU6-205P-201ENST00000390858 107 ntBASIC2.02□□□□□ -2.09
TRIM56Q9BRZ2 AP003716.2-201ENST00000528260 108 ntBASIC2.02□□□□□ -2.09
TRIM56Q9BRZ2 AC138749.4-201ENST00000563970 127 ntBASIC2.02□□□□□ -2.09
TRIM56Q9BRZ2 MIR8066-201ENST00000617280 78 ntBASIC2.02□□□□□ -2.09
TRIM56Q9BRZ2 U6.109-201ENST00000636749 87 ntBASIC2.02□□□□□ -2.09
TRIM56Q9BRZ2 MIR30D-201ENST00000362283 70 ntBASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 MIR1255A-201ENST00000408338 113 ntBASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 RNU6-613P-201ENST00000410412 108 ntBASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 MIR3664-201ENST00000579074 99 ntBASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 MIR4500-201ENST00000579472 76 ntBASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
TRIM56Q9BRZ2 AC025521.1-201ENST00000621624 286 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 292.9 ms