Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC096720.1-201ENST00000604441 183 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 MIR376B-201ENST00000614515 100 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 AL662814.1-201ENST00000617364 121 ntBASIC1.42□□□□□ -2.18
TIMP4Q99727 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TIMP4Q99727 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
TIMP4Q99727 MIR103A2-201ENST00000362154 78 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 SNORD114-10-201ENST00000363409 72 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 Y_RNA.338-201ENST00000365320 114 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 RNU6-1065P-201ENST00000384513 106 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 RNA5SP95-201ENST00000410319 137 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 AC004941.2-201ENST00000427009 228 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 AC109327.2-201ENST00000448339 378 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 RNU6-158P-201ENST00000517104 100 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 MIR4777-201ENST00000583710 86 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 MIR6516-201ENST00000630554 81 ntBASIC1.41□□□□□ -2.18
TIMP4Q99727 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TIMP4Q99727 RNA5SP264-201ENST00000363115 107 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 RNU6-654P-201ENST00000364373 107 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 Y_RNA.377-201ENST00000365644 108 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 Y_RNA.467-201ENST00000384297 102 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 MIR1185-1-201ENST00000408598 86 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 MRPL35P3-201ENST00000421557 364 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 MIR2115-201ENST00000516657 100 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 MIR4498-201ENST00000577599 66 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 MIR3664-201ENST00000579074 99 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 MIR6740-201ENST00000618268 113 ntBASIC1.4□□□□□ -2.19
TIMP4Q99727 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
TIMP4Q99727 Y_RNA.95-201ENST00000363079 95 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 SNORD73B-201ENST00000364394 72 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 Y_RNA.466-201ENST00000384294 113 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 RNU7-62P-201ENST00000458856 62 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 RNU7-48P-201ENST00000458875 63 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 AC133485.1-201ENST00000567176 124 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 RNU6-86P-201ENST00000606534 107 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 U7.3-201ENST00000616123 62 ntBASIC1.39□□□□□ -2.19
TIMP4Q99727 SNORD33-201ENST00000362761 85 ntBASIC1.38□□□□□ -2.19
TIMP4Q99727 Y_RNA.98-201ENST00000363109 102 ntBASIC1.38□□□□□ -2.19
TIMP4Q99727 SPINT5P-201ENST00000448174 155 ntBASIC1.38□□□□□ -2.19
TIMP4Q99727 RNU6-165P-201ENST00000517170 99 ntBASIC1.38□□□□□ -2.19
TIMP4Q99727 RNU6-844P-201ENST00000517175 102 ntBASIC1.38□□□□□ -2.19
TIMP4Q99727 MIR4264-201ENST00000583520 66 ntBASIC1.38□□□□□ -2.19
TIMP4Q99727 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
TIMP4Q99727 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
TIMP4Q99727 SNORD38.1-201ENST00000363863 68 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 Y_RNA.290-201ENST00000364879 114 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-949P-201ENST00000384040 107 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TIMP4Q99727 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-1165P-201ENST00000410119 107 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-447P-201ENST00000410293 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-1118P-201ENST00000410382 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-1076P-201ENST00000410397 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-355P-201ENST00000410427 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-791P-201ENST00000410467 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-705P-201ENST00000410601 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-1100P-201ENST00000410691 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-860P-201ENST00000410860 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-1217P-201ENST00000411276 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-785P-201ENST00000411324 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 RNU6-1006P-201ENST00000516998 103 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.37□□□□□ -2.19
TIMP4Q99727 AP003716.2-201ENST00000528260 108 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 MTND5P40-201ENST00000559945 246 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 uc_338.6-201ENST00000613544 171 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 U6.90-201ENST00000614007 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 U6.70-201ENST00000620287 104 ntBASIC1.37□□□□□ -2.19
TIMP4Q99727 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TIMP4Q99727 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TIMP4Q99727 RNU6-1134P-201ENST00000365156 101 ntBASIC1.36□□□□□ -2.19
TIMP4Q99727 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
TIMP4Q99727 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.36□□□□□ -2.19
TIMP4Q99727 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.36□□□□□ -2.19
TIMP4Q99727 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
TIMP4Q99727 AC048334.1-201ENST00000477975 159 ntBASIC1.36□□□□□ -2.19
TIMP4Q99727 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
TIMP4Q99727 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TIMP4Q99727 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TIMP4Q99727 Y_RNA.190-201ENST00000363964 101 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RNU6-1163P-201ENST00000364516 107 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 Y_RNA.558-201ENST00000384685 113 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 MIR563-201ENST00000385080 79 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 MIR548G-201ENST00000408442 89 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 AC096949.1-201ENST00000412047 152 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
TIMP4Q99727 RNU6-1053P-201ENST00000515930 101 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 254.2 ms