Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.78□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.78□□□□□ -2.53
CLHC1Q8NHS4 SNORD114-10-201ENST00000363409 72 ntBASIC-0.78□□□□□ -2.53
CLHC1Q8NHS4 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.78□□□□□ -2.53
CLHC1Q8NHS4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.78□□□□□ -2.53
CLHC1Q8NHS4 RNU6-138P-201ENST00000515952 107 ntBASIC-0.78□□□□□ -2.53
CLHC1Q8NHS4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.78□□□□□ -2.53
CLHC1Q8NHS4 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 RNU6-480P-201ENST00000384332 107 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 RNA5SP144-201ENST00000410846 116 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 AC097635.1-201ENST00000450678 155 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 AC114755.3-201ENST00000481111 251 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 FGF7P4-201ENST00000509595 295 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.79□□□□□ -2.54
CLHC1Q8NHS4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 RNU4-16P-201ENST00000364737 141 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 MIR599-201ENST00000385069 95 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 RNU4-43P-201ENST00000410628 137 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 RNU6-453P-201ENST00000516819 85 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 MIR548AX-201ENST00000580117 73 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 MIR3920-201ENST00000581751 86 ntBASIC-0.8□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 U8.6-201ENST00000364939 135 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 MIR635-201ENST00000384830 98 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 AC138393.2-201ENST00000414742 246 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 SNORD67.1-201ENST00000516618 108 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 IGKV1-22-201ENST00000524313 326 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 AC105081.1-201ENST00000617727 106 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.81□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 MIR519A1-201ENST00000385257 85 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 RNU6-735P-201ENST00000410612 107 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 RNU7-74P-201ENST00000459104 62 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 RNU7-113P-201ENST00000459273 62 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 TRAJ51-201ENST00000504127 63 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 MIR3681-201ENST00000580089 72 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 MIR4432-201ENST00000581823 84 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 AL359881.1-201ENST00000602916 267 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.82□□□□□ -2.54
CLHC1Q8NHS4 RNY1P6-201ENST00000384193 109 ntBASIC-0.83□□□□□ -2.54
CLHC1Q8NHS4 SNORA79-201ENST00000408376 140 ntBASIC-0.83□□□□□ -2.54
CLHC1Q8NHS4 MIR1252-201ENST00000408861 65 ntBASIC-0.83□□□□□ -2.54
CLHC1Q8NHS4 RNA5SP33-201ENST00000516687 98 ntBASIC-0.83□□□□□ -2.54
CLHC1Q8NHS4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.83□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.84□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.84□□□□□ -2.54
CLHC1Q8NHS4 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.84□□□□□ -2.54
CLHC1Q8NHS4 RNU6-823P-201ENST00000391042 103 ntBASIC-0.84□□□□□ -2.54
CLHC1Q8NHS4 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.84□□□□□ -2.54
CLHC1Q8NHS4 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.84□□□□□ -2.54
CLHC1Q8NHS4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.84□□□□□ -2.54
CLHC1Q8NHS4 RNU6-978P-201ENST00000364371 103 ntBASIC-0.85□□□□□ -2.55
CLHC1Q8NHS4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.85□□□□□ -2.55
CLHC1Q8NHS4 MIR624-201ENST00000385217 97 ntBASIC-0.85□□□□□ -2.55
CLHC1Q8NHS4 AL603914.1-201ENST00000401964 204 ntBASIC-0.85□□□□□ -2.55
CLHC1Q8NHS4 AC082651.2-201ENST00000496833 166 ntBASIC-0.85□□□□□ -2.55
CLHC1Q8NHS4 RNU6-561P-201ENST00000516222 102 ntBASIC-0.85□□□□□ -2.55
CLHC1Q8NHS4 U6atac.1-201ENST00000616025 117 ntBASIC-0.85□□□□□ -2.55
CLHC1Q8NHS4 SNORA25.7-201ENST00000364375 127 ntBASIC-0.86□□□□□ -2.55
CLHC1Q8NHS4 RNU6-728P-201ENST00000365375 104 ntBASIC-0.86□□□□□ -2.55
CLHC1Q8NHS4 SNORA32-201ENST00000384072 121 ntBASIC-0.86□□□□□ -2.55
CLHC1Q8NHS4 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.86□□□□□ -2.55
CLHC1Q8NHS4 SNORD2.1-201ENST00000458762 69 ntBASIC-0.86□□□□□ -2.55
CLHC1Q8NHS4 SERF1AP1-201ENST00000514575 187 ntBASIC-0.86□□□□□ -2.55
CLHC1Q8NHS4 AP001328.1-201ENST00000528550 176 ntBASIC-0.86□□□□□ -2.55
CLHC1Q8NHS4 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.87□□□□□ -2.55
CLHC1Q8NHS4 RNU6-381P-201ENST00000391259 108 ntBASIC-0.87□□□□□ -2.55
CLHC1Q8NHS4 MIR548I2-201ENST00000408348 149 ntBASIC-0.87□□□□□ -2.55
CLHC1Q8NHS4 SNORD116-25-201ENST00000516517 92 ntBASIC-0.87□□□□□ -2.55
CLHC1Q8NHS4 MTND5P40-201ENST00000559945 246 ntBASIC-0.87□□□□□ -2.55
CLHC1Q8NHS4 AC093783.1-201ENST00000612976 329 ntBASIC-0.87□□□□□ -2.55
CLHC1Q8NHS4 AL391099.1-201ENST00000624635 187 ntBASIC-0.87□□□□□ -2.55
CLHC1Q8NHS4 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 RNU6-770P-201ENST00000363929 105 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 MIR181B2-201ENST00000385004 89 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 MTATP6P23-201ENST00000440153 476 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 RNU7-13P-201ENST00000516413 62 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 RNU7-188P-201ENST00000517063 64 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 MIR548AE2-201ENST00000583456 67 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 AC006504.6-201ENST00000590142 199 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 AC069503.3-201ENST00000618674 145 ntBASIC-0.88□□□□□ -2.55
CLHC1Q8NHS4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
CLHC1Q8NHS4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.89□□□□□ -2.55
CLHC1Q8NHS4 AC093423.1-201ENST00000440817 142 ntBASIC-0.89□□□□□ -2.55
CLHC1Q8NHS4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.89□□□□□ -2.55
CLHC1Q8NHS4 uc_338.10-201ENST00000621872 182 ntBASIC-0.89□□□□□ -2.55
CLHC1Q8NHS4 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 246.1 ms