Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 SNORD111-201ENST00000408139 94 ntBASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 RNA5SP476-201ENST00000516613 103 ntBASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 AL670379.3-201ENST00000605040 251 ntBASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 AC211469.2-201ENST00000605461 205 ntBASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 AC008163.1-202ENST00000636004 2889 ntBASIC1.46□□□□□ -2.18
SMC1BQ8NDV3 RNU6-580P-201ENST00000365159 107 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 SNORA32-201ENST00000384072 121 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 AC063976.4-201ENST00000421971 163 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 RPL39P25-201ENST00000449384 154 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 Y_RNA.649-201ENST00000459077 103 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 SNORD33.1-201ENST00000516213 88 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 AL662814.1-201ENST00000617364 121 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 MIR6740-201ENST00000618268 113 ntBASIC1.45□□□□□ -2.18
SMC1BQ8NDV3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SMC1BQ8NDV3 Y_RNA.291-201ENST00000364886 113 ntBASIC1.44□□□□□ -2.18
SMC1BQ8NDV3 AC036111.3-201ENST00000526389 112 ntBASIC1.44□□□□□ -2.18
SMC1BQ8NDV3 AC019288.1-201ENST00000557918 224 ntBASIC1.44□□□□□ -2.18
SMC1BQ8NDV3 AC023827.1-201ENST00000569247 97 ntBASIC1.44□□□□□ -2.18
SMC1BQ8NDV3 AC106800.4-201ENST00000614905 153 ntBASIC1.44□□□□□ -2.18
SMC1BQ8NDV3 AC012676.2-201ENST00000619258 186 ntBASIC1.44□□□□□ -2.18
SMC1BQ8NDV3 RNU6-834P-201ENST00000362367 110 ntBASIC1.43□□□□□ -2.18
SMC1BQ8NDV3 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
SMC1BQ8NDV3 MIR563-201ENST00000385080 79 ntBASIC1.43□□□□□ -2.18
SMC1BQ8NDV3 RNU7-35P-201ENST00000517174 62 ntBASIC1.43□□□□□ -2.18
SMC1BQ8NDV3 AC141846.1-201ENST00000568348 142 ntBASIC1.43□□□□□ -2.18
SMC1BQ8NDV3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
SMC1BQ8NDV3 Y_RNA.353-201ENST00000365440 108 ntBASIC1.42□□□□□ -2.18
SMC1BQ8NDV3 MT-TF-201ENST00000387314 71 ntBASIC1.42□□□□□ -2.18
SMC1BQ8NDV3 MIR18B-201ENST00000454574 71 ntBASIC1.42□□□□□ -2.18
SMC1BQ8NDV3 RNU7-79P-201ENST00000516082 62 ntBASIC1.42□□□□□ -2.18
SMC1BQ8NDV3 MTND5P34-201ENST00000568888 325 ntBASIC1.42□□□□□ -2.18
SMC1BQ8NDV3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.41□□□□□ -2.18
SMC1BQ8NDV3 RNU6-994P-201ENST00000410507 111 ntBASIC1.41□□□□□ -2.18
SMC1BQ8NDV3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.41□□□□□ -2.18
SMC1BQ8NDV3 CYP3A137P-201ENST00000562436 69 ntBASIC1.41□□□□□ -2.18
SMC1BQ8NDV3 AC027335.2-201ENST00000624030 375 ntBASIC1.41□□□□□ -2.18
SMC1BQ8NDV3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
SMC1BQ8NDV3 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
SMC1BQ8NDV3 MIR373-201ENST00000362273 69 ntBASIC1.4□□□□□ -2.19
SMC1BQ8NDV3 MIR548D2-201ENST00000384955 97 ntBASIC1.4□□□□□ -2.19
SMC1BQ8NDV3 MT-TI-201ENST00000387365 69 ntBASIC1.4□□□□□ -2.19
SMC1BQ8NDV3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.4□□□□□ -2.19
SMC1BQ8NDV3 AC002429.1-201ENST00000437672 148 ntBASIC1.4□□□□□ -2.19
SMC1BQ8NDV3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SMC1BQ8NDV3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 RNA5SP257-201ENST00000363023 116 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 RNU6-476P-201ENST00000384726 107 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 AC067940.1-201ENST00000458411 300 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 RNU7-40P-201ENST00000516397 64 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 FAM71BP1-201ENST00000604431 523 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 MIR924-201ENST00000638017 53 ntBASIC1.39□□□□□ -2.19
SMC1BQ8NDV3 MIR30D-201ENST00000362283 70 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 MIR548A1-201ENST00000385041 97 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 Y_RNA.629-201ENST00000411368 105 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 HAR1A.1-201ENST00000459583 118 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 AC007012.1-201ENST00000567192 175 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 AL109933.3-201ENST00000619095 188 ntBASIC1.38□□□□□ -2.19
SMC1BQ8NDV3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 RNY1P13-201ENST00000365030 105 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 RNU6-934P-201ENST00000365154 107 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 RNU6-949P-201ENST00000384040 107 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 SNORD116-21-201ENST00000384507 92 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 RNU6-735P-201ENST00000410612 107 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 RNA5SP121-201ENST00000516537 101 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 RNA5SP330-201ENST00000517096 96 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 RNU6-94P-201ENST00000607728 107 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 AC087741.2-201ENST00000619415 172 ntBASIC1.37□□□□□ -2.19
SMC1BQ8NDV3 SNORD115-19-201ENST00000363098 82 ntBASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 SNORD115-18-201ENST00000363293 82 ntBASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 RNA5SP62-201ENST00000363457 110 ntBASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 SNORD115-17-201ENST00000364612 82 ntBASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 RNU6-880P-201ENST00000384526 107 ntBASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
SMC1BQ8NDV3 SNORD114-10-201ENST00000363409 72 ntBASIC1.35□□□□□ -2.19
SMC1BQ8NDV3 SNORD83.1-201ENST00000411362 77 ntBASIC1.35□□□□□ -2.19
SMC1BQ8NDV3 MIR4679-2-201ENST00000578358 77 ntBASIC1.35□□□□□ -2.19
SMC1BQ8NDV3 uc_338.6-201ENST00000613544 171 ntBASIC1.35□□□□□ -2.19
SMC1BQ8NDV3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 RNU6-616P-201ENST00000384353 107 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 MIR200A-201ENST00000384875 90 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 MIR1257-201ENST00000408490 117 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 MIR1270-201ENST00000459320 83 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 RNU6-412P-201ENST00000516434 106 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 SNORD67.1-201ENST00000516618 108 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 MIR4771-2-201ENST00000577758 74 ntBASIC1.34□□□□□ -2.19
SMC1BQ8NDV3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 400.3 ms