Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 MIR377-201ENST00000362145 69 ntBASIC1.64□□□□□ -2.15
E4F1Q66K89 MIR30D-201ENST00000362283 70 ntBASIC1.64□□□□□ -2.15
E4F1Q66K89 Y_RNA.98-201ENST00000363109 102 ntBASIC1.64□□□□□ -2.15
E4F1Q66K89 SNORD45B-201ENST00000364617 72 ntBASIC1.64□□□□□ -2.15
E4F1Q66K89 Y_RNA.377-201ENST00000365644 108 ntBASIC1.64□□□□□ -2.15
E4F1Q66K89 AC012531.4-201ENST00000616509 177 ntBASIC1.64□□□□□ -2.15
E4F1Q66K89 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.64□□□□□ -2.15
E4F1Q66K89 Y_RNA.43-201ENST00000362670 111 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 RNU6-170P-201ENST00000362832 104 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 Y_RNA.93-201ENST00000363066 109 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 Y_RNA.247-201ENST00000364500 92 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 SNORA75.2-201ENST00000391138 150 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 SNORA75.3-201ENST00000391231 150 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 MIR1289-2-201ENST00000408360 111 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 MTATP8P2-201ENST00000435212 202 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 MIR5582-201ENST00000579697 68 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 MIR7974-201ENST00000615835 79 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 AC091304.10-201ENST00000641554 121 ntBASIC1.63□□□□□ -2.15
E4F1Q66K89 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
E4F1Q66K89 RNU6-1255P-201ENST00000363434 112 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 MT-TF-201ENST00000387314 71 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 snoU13.26-201ENST00000459452 105 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 MIR548Z-201ENST00000584743 97 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 AP001362.1-201ENST00000625165 124 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 MIR2052-201ENST00000636055 55 ntBASIC1.62□□□□□ -2.15
E4F1Q66K89 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
E4F1Q66K89 Y_RNA.168-201ENST00000363740 102 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 RNU1-42P-201ENST00000364033 160 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 RNU6-910P-201ENST00000390844 107 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 U8.15-201ENST00000390947 134 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 MIR4298-201ENST00000584380 73 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 U6.109-201ENST00000636749 87 ntBASIC1.61□□□□□ -2.15
E4F1Q66K89 SNORD38.1-201ENST00000363863 68 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 RNU6-1131P-201ENST00000364955 107 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 Y_RNA.363-201ENST00000365529 113 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 MRPL35P3-201ENST00000421557 364 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 snoU13.21-201ENST00000459368 105 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 RNU7-61P-201ENST00000515897 61 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 RNU6-1006P-201ENST00000516998 103 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 AC023827.1-201ENST00000569247 97 ntBASIC1.6□□□□□ -2.15
E4F1Q66K89 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
E4F1Q66K89 Y_RNA.95-201ENST00000363079 95 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 RNU6-580P-201ENST00000365159 107 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 SNORD38.2-201ENST00000384470 69 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 RNU6-644P-201ENST00000391155 98 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 SNORD93-201ENST00000408813 74 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 AL591704.2-201ENST00000421658 181 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 AC004941.2-201ENST00000427009 228 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 SPINT5P-201ENST00000448174 155 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 SNORA25.15-201ENST00000516487 89 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 RNU6-158P-201ENST00000517104 100 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 MTND5P40-201ENST00000559945 246 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 AC012676.2-201ENST00000619258 186 ntBASIC1.59□□□□□ -2.15
E4F1Q66K89 RNA5SP133-201ENST00000363368 119 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 SNORD113.3-201ENST00000364630 78 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 RNU6-60P-201ENST00000364792 103 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 Y_RNA.467-201ENST00000384297 102 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 SNORA26.9-201ENST00000391322 122 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 SNORD83.1-201ENST00000411362 77 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 AC109327.2-201ENST00000448339 378 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 MIR18B-201ENST00000454574 71 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 SNORD13-201ENST00000459299 104 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 AC138749.4-201ENST00000563970 127 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 AC006254.2-201ENST00000603259 279 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
E4F1Q66K89 AC023934.1-201ENST00000574529 2389 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
E4F1Q66K89 Y_RNA.140-201ENST00000363474 103 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 RNY1P2-201ENST00000364820 117 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 MIR488-201ENST00000365739 83 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 Y_RNA.466-201ENST00000384294 113 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 AC036111.3-201ENST00000526389 112 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
E4F1Q66K89 MIR4500-201ENST00000579472 76 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 AC090897.1-201ENST00000580909 226 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 MIR4777-201ENST00000583710 86 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 RNU6-90P-201ENST00000606352 106 ntBASIC1.57□□□□□ -2.16
E4F1Q66K89 RNU6-403P-201ENST00000363163 104 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 Y_RNA.220-201ENST00000364244 109 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 RNA5SP190-201ENST00000365222 118 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 SNORA80D-201ENST00000384488 135 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 MIR548G-201ENST00000408442 89 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 AC015818.7-201ENST00000428754 109 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 AC087499.7-201ENST00000441958 109 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 RNU6-162P-201ENST00000516228 103 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 AC068338.1-201ENST00000565567 176 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 RNU6-86P-201ENST00000606534 107 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 MALAT1.1-201ENST00000618249 95 ntBASIC1.56□□□□□ -2.16
E4F1Q66K89 Y_RNA.342-201ENST00000365352 113 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms