Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 snoU13.25-201ENST00000458945 104 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 AC023790.1-201ENST00000482174 347 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 RNU6-850P-201ENST00000516934 103 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 MIR4435-1-201ENST00000582552 80 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 GHRLOS.1-201ENST00000610995 70 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RNF20Q5VTR2 AC244636.1-201ENST00000421152 228 ntBASIC2.46□□□□□ -2.02
RNF20Q5VTR2 AC019288.1-201ENST00000557918 224 ntBASIC2.46□□□□□ -2.02
RNF20Q5VTR2 AC015688.6-201ENST00000577737 104 ntBASIC2.46□□□□□ -2.02
RNF20Q5VTR2 MIR4662A-201ENST00000637499 67 ntBASIC2.46□□□□□ -2.02
RNF20Q5VTR2 MIR30D-201ENST00000362283 70 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 MIR889-201ENST00000401280 79 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 RNU6-1165P-201ENST00000410119 107 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 RNA5SP508-201ENST00000411327 119 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.45□□□□□ -2.02
RNF20Q5VTR2 SNRPGP12-201ENST00000449481 213 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 RNU7-62P-201ENST00000458856 62 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 SNORA77B-201ENST00000578179 125 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 MIR219B-201ENST00000637023 88 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 AL161722.3-201ENST00000605789 2983 ntBASIC2.45□□□□□ -2.02
RNF20Q5VTR2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RNF20Q5VTR2 RNU6-776P-201ENST00000364403 104 ntBASIC2.44□□□□□ -2.02
RNF20Q5VTR2 RNU6-1022P-201ENST00000365049 104 ntBASIC2.44□□□□□ -2.02
RNF20Q5VTR2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RNF20Q5VTR2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RNF20Q5VTR2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RNF20Q5VTR2 Z98742.3-201ENST00000418637 326 ntBASIC2.44□□□□□ -2.02
RNF20Q5VTR2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RNF20Q5VTR2 MIR4264-201ENST00000583520 66 ntBASIC2.44□□□□□ -2.02
RNF20Q5VTR2 uc_338.6-201ENST00000613544 171 ntBASIC2.44□□□□□ -2.02
RNF20Q5VTR2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RNF20Q5VTR2 AL359851.1-201ENST00000569460 4997 ntBASIC2.43□□□□□ -2.02
RNF20Q5VTR2 RNA5SP160-201ENST00000364866 120 ntBASIC2.43□□□□□ -2.02
RNF20Q5VTR2 SNORD4B-201ENST00000459083 72 ntBASIC2.43□□□□□ -2.02
RNF20Q5VTR2 RN7SL274P-201ENST00000492268 272 ntBASIC2.43□□□□□ -2.02
RNF20Q5VTR2 MIR8063-201ENST00000621930 81 ntBASIC2.43□□□□□ -2.02
RNF20Q5VTR2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RNF20Q5VTR2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RNF20Q5VTR2 SNORA3.2-201ENST00000408221 125 ntBASIC2.42□□□□□ -2.02
RNF20Q5VTR2 MIR2115-201ENST00000516657 100 ntBASIC2.42□□□□□ -2.02
RNF20Q5VTR2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF20Q5VTR2 AC140658.3-201ENST00000567603 271 ntBASIC2.42□□□□□ -2.02
RNF20Q5VTR2 MIR4712-201ENST00000583750 82 ntBASIC2.42□□□□□ -2.02
RNF20Q5VTR2 MIR4448-201ENST00000584360 86 ntBASIC2.42□□□□□ -2.02
RNF20Q5VTR2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.42□□□□□ -2.02
RNF20Q5VTR2 MIR6516-201ENST00000630554 81 ntBASIC2.42□□□□□ -2.02
RNF20Q5VTR2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.42□□□□□ -2.02
RNF20Q5VTR2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RNF20Q5VTR2 SNORA64-201ENST00000384674 134 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 MIR1236-201ENST00000408340 102 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 RNA5SP95-201ENST00000410319 137 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 RNA5SP338-201ENST00000410495 85 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 RN7SKP223-201ENST00000410582 62 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 AC245517.4-201ENST00000448601 281 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 MIR514B-201ENST00000516774 80 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 RNA5SP364-201ENST00000516938 78 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 MIR8074-201ENST00000615081 81 ntBASIC2.41□□□□□ -2.02
RNF20Q5VTR2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
RNF20Q5VTR2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.41□□□□□ -2.02
RNF20Q5VTR2 RNU7-85P-201ENST00000458851 63 ntBASIC2.4□□□□□ -2.03
RNF20Q5VTR2 RNU6-250P-201ENST00000516958 103 ntBASIC2.4□□□□□ -2.03
RNF20Q5VTR2 MIR4713-201ENST00000582691 75 ntBASIC2.4□□□□□ -2.03
RNF20Q5VTR2 RNU6-654P-201ENST00000364373 107 ntBASIC2.39□□□□□ -2.03
RNF20Q5VTR2 RNU6-571P-201ENST00000384128 107 ntBASIC2.39□□□□□ -2.03
RNF20Q5VTR2 MIR1185-1-201ENST00000408598 86 ntBASIC2.39□□□□□ -2.03
RNF20Q5VTR2 MIR4299-201ENST00000577899 72 ntBASIC2.39□□□□□ -2.03
RNF20Q5VTR2 MIR4513-201ENST00000581077 86 ntBASIC2.39□□□□□ -2.03
RNF20Q5VTR2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.39□□□□□ -2.03
RNF20Q5VTR2 uc_338.20-201ENST00000621563 178 ntBASIC2.39□□□□□ -2.03
RNF20Q5VTR2 RNA5SP126-201ENST00000365092 109 ntBASIC2.38□□□□□ -2.03
RNF20Q5VTR2 SNORA67.3-201ENST00000384366 140 ntBASIC2.38□□□□□ -2.03
RNF20Q5VTR2 RPL30P7-201ENST00000479312 323 ntBASIC2.38□□□□□ -2.03
RNF20Q5VTR2 AL133373.1-201ENST00000497098 94 ntBASIC2.38□□□□□ -2.03
RNF20Q5VTR2 SNORA25.13-201ENST00000516395 103 ntBASIC2.38□□□□□ -2.03
RNF20Q5VTR2 AL512598.1-201ENST00000610158 273 ntBASIC2.38□□□□□ -2.03
RNF20Q5VTR2 MIR103A2-201ENST00000362154 78 ntBASIC2.37□□□□□ -2.03
RNF20Q5VTR2 MT-TN-201ENST00000387400 73 ntBASIC2.37□□□□□ -2.03
RNF20Q5VTR2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.37□□□□□ -2.03
RNF20Q5VTR2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.37□□□□□ -2.03
RNF20Q5VTR2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.37□□□□□ -2.03
RNF20Q5VTR2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF20Q5VTR2 MIR516A2-201ENST00000384888 90 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 MIR516A1-201ENST00000385033 90 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 snoU13.11-201ENST00000459219 104 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 AC005908.1-201ENST00000468701 347 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 RNU6-65P-201ENST00000516332 98 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 RNU6-531P-201ENST00000516694 104 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 SNORA25.16-201ENST00000516741 121 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 AC019176.1-201ENST00000518519 225 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 MIR5089-201ENST00000580047 84 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 SNRPGP19-201ENST00000603826 189 ntBASIC2.36□□□□□ -2.03
RNF20Q5VTR2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RNF20Q5VTR2 RNA5SP264-201ENST00000363115 107 ntBASIC2.35□□□□□ -2.03
RNF20Q5VTR2 SNORA72.6-201ENST00000384520 129 ntBASIC2.35□□□□□ -2.03
RNF20Q5VTR2 MT-TF-201ENST00000387314 71 ntBASIC2.35□□□□□ -2.03
RNF20Q5VTR2 SNORD93-201ENST00000408813 74 ntBASIC2.35□□□□□ -2.03
RNF20Q5VTR2 Y_RNA.648-201ENST00000459455 110 ntBASIC2.35□□□□□ -2.03
RNF20Q5VTR2 AP003716.2-201ENST00000528260 108 ntBASIC2.35□□□□□ -2.03
RNF20Q5VTR2 MIR4491-201ENST00000581087 68 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 290.7 ms