Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNU6-1113P-201ENST00000384348 107 ntBASIC1.62□□□□□ -2.15
ZNF394Q53GI3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.62□□□□□ -2.15
ZNF394Q53GI3 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
ZNF394Q53GI3 AC023827.1-201ENST00000569247 97 ntBASIC1.62□□□□□ -2.15
ZNF394Q53GI3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.62□□□□□ -2.15
ZNF394Q53GI3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 RNU6-865P-201ENST00000364772 107 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 RNU6-60P-201ENST00000364792 103 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 RNU6-934P-201ENST00000365154 107 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 MIR19B1-201ENST00000384829 87 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 RNU6-955P-201ENST00000410497 104 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 RNU6-994P-201ENST00000410507 111 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 AC002429.1-201ENST00000437672 148 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 AL603825.1-201ENST00000438481 80 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 RNU7-48P-201ENST00000458875 63 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 PDCD5P2-201ENST00000507570 312 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 AC108729.3-201ENST00000513484 108 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 MIR4694-201ENST00000578534 80 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 uc_338.6-201ENST00000613544 171 ntBASIC1.61□□□□□ -2.15
ZNF394Q53GI3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 RNY1P2-201ENST00000364820 117 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 MIR150-201ENST00000385048 84 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 U8.15-201ENST00000390947 134 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 MIR1257-201ENST00000408490 117 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 SNORA7.5-201ENST00000410672 110 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 AC067940.1-201ENST00000458411 300 ntBASIC1.6□□□□□ -2.15
ZNF394Q53GI3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF394Q53GI3 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
ZNF394Q53GI3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.59□□□□□ -2.15
ZNF394Q53GI3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.59□□□□□ -2.15
ZNF394Q53GI3 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
ZNF394Q53GI3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.59□□□□□ -2.16
ZNF394Q53GI3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZNF394Q53GI3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ZNF394Q53GI3 Y_RNA.10-201ENST00000362371 110 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 SNORA25.8-201ENST00000364831 128 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 RNU6-106P-201ENST00000384405 107 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 SNORD93-201ENST00000408813 74 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 AL031737.1-201ENST00000450125 223 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 RNU7-185P-201ENST00000459215 60 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 AP001362.1-201ENST00000625165 124 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 AL512310.12-203ENST00000640543 90 ntBASIC1.58□□□□□ -2.16
ZNF394Q53GI3 RNY3P2-201ENST00000362918 102 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 MIR200A-201ENST00000384875 90 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 RNU6-679P-201ENST00000391003 106 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 RPS26P5-201ENST00000418544 335 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 AC019288.1-201ENST00000557918 224 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 MIR4781-201ENST00000585250 76 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 AC105081.1-201ENST00000617727 106 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 AC023934.1-201ENST00000574529 2389 ntBASIC1.57□□□□□ -2.16
ZNF394Q53GI3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
ZNF394Q53GI3 RNU4-36P-201ENST00000364294 144 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 RNU1-36P-201ENST00000365130 165 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 SNORD38.2-201ENST00000384470 69 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 RNU4-62P-201ENST00000410125 130 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 SNORD83.1-201ENST00000411362 77 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 AC108667.1-201ENST00000428618 249 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 MIR4771-2-201ENST00000577758 74 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 MIR4771-1-201ENST00000582617 74 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 uc_338.28-201ENST00000612082 187 ntBASIC1.56□□□□□ -2.16
ZNF394Q53GI3 RNU6-554P-201ENST00000410466 106 ntBASIC1.55□□□□□ -2.16
ZNF394Q53GI3 MTATP6P29-201ENST00000415057 132 ntBASIC1.55□□□□□ -2.16
ZNF394Q53GI3 snoU13.21-201ENST00000459368 105 ntBASIC1.55□□□□□ -2.16
ZNF394Q53GI3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.55□□□□□ -2.16
ZNF394Q53GI3 AC096720.1-201ENST00000604441 183 ntBASIC1.55□□□□□ -2.16
ZNF394Q53GI3 AL136317.1-201ENST00000612653 226 ntBASIC1.55□□□□□ -2.16
ZNF394Q53GI3 MIR1-1-201ENST00000362147 71 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 MIR378A-201ENST00000362177 66 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 RNU6-766P-201ENST00000362478 107 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 SNORA63.4-201ENST00000362763 126 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 RNU1-124P-201ENST00000363861 145 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 MIR605-201ENST00000385078 83 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 AL353813.1-201ENST00000440700 253 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 RNU7-40P-201ENST00000516397 64 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.54□□□□□ -2.16
ZNF394Q53GI3 MIR26B-201ENST00000362251 77 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 MIR125B2-201ENST00000385128 89 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 AC096949.1-201ENST00000412047 152 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 RPS29P28-201ENST00000446439 141 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 RNU6-1194P-201ENST00000516208 104 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 AC141557.1-201ENST00000540982 400 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 AC138749.4-201ENST00000563970 127 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 MIR376B-201ENST00000614515 100 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 AL442128.1-201ENST00000615151 90 ntBASIC1.53□□□□□ -2.16
ZNF394Q53GI3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZNF394Q53GI3 RNU6-832P-201ENST00000363319 107 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms