Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
RTP1P59025 AC105081.1-201ENST00000617727 106 ntBASIC1.98□□□□□ -2.09
RTP1P59025 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RTP1P59025 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RTP1P59025 SNORD114-10-201ENST00000363409 72 ntBASIC1.97□□□□□ -2.09
RTP1P59025 SNORD38.1-201ENST00000363863 68 ntBASIC1.97□□□□□ -2.09
RTP1P59025 RNU6-1163P-201ENST00000364516 107 ntBASIC1.97□□□□□ -2.09
RTP1P59025 RNU6-813P-201ENST00000384691 107 ntBASIC1.97□□□□□ -2.09
RTP1P59025 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RTP1P59025 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.97□□□□□ -2.09
RTP1P59025 MIR3192-201ENST00000584920 77 ntBASIC1.97□□□□□ -2.09
RTP1P59025 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RTP1P59025 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RTP1P59025 U8.15-201ENST00000390947 134 ntBASIC1.96□□□□□ -2.1
RTP1P59025 MIR1276-201ENST00000408707 83 ntBASIC1.96□□□□□ -2.1
RTP1P59025 RPS29P28-201ENST00000446439 141 ntBASIC1.96□□□□□ -2.1
RTP1P59025 SNORD111.1-201ENST00000516421 86 ntBASIC1.96□□□□□ -2.1
RTP1P59025 AP003327.1-201ENST00000529684 127 ntBASIC1.96□□□□□ -2.1
RTP1P59025 RNU6-86P-201ENST00000606534 107 ntBASIC1.96□□□□□ -2.1
RTP1P59025 AL773524.1-201ENST00000614065 229 ntBASIC1.96□□□□□ -2.1
RTP1P59025 SEPT14P17-201ENST00000617978 177 ntBASIC1.96□□□□□ -2.1
RTP1P59025 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
RTP1P59025 RNY1P13-201ENST00000365030 105 ntBASIC1.95□□□□□ -2.1
RTP1P59025 Y_RNA.327-201ENST00000365201 102 ntBASIC1.95□□□□□ -2.1
RTP1P59025 SNORD58A-201ENST00000383875 65 ntBASIC1.95□□□□□ -2.1
RTP1P59025 AC244023.1-201ENST00000426884 112 ntBASIC1.95□□□□□ -2.1
RTP1P59025 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
RTP1P59025 AC242498.1-201ENST00000604134 111 ntBASIC1.95□□□□□ -2.1
RTP1P59025 PRELID3BP2-201ENST00000605362 201 ntBASIC1.95□□□□□ -2.1
RTP1P59025 AL096861.1-201ENST00000610899 123 ntBASIC1.95□□□□□ -2.1
RTP1P59025 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RTP1P59025 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RTP1P59025 RNU6-865P-201ENST00000364772 107 ntBASIC1.94□□□□□ -2.1
RTP1P59025 RNU6-1275P-201ENST00000391087 107 ntBASIC1.94□□□□□ -2.1
RTP1P59025 MIR1302-7-201ENST00000408841 72 ntBASIC1.94□□□□□ -2.1
RTP1P59025 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
RTP1P59025 AC015688.6-201ENST00000577737 104 ntBASIC1.94□□□□□ -2.1
RTP1P59025 SNORA4-201ENST00000584302 138 ntBASIC1.94□□□□□ -2.1
RTP1P59025 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.94□□□□□ -2.1
RTP1P59025 IGLL4P-201ENST00000614590 133 ntBASIC1.94□□□□□ -2.1
RTP1P59025 RNA5SP48-201ENST00000363969 126 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNY1P1-201ENST00000364372 112 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-675P-201ENST00000384236 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-447P-201ENST00000410293 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-1118P-201ENST00000410382 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-1076P-201ENST00000410397 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-355P-201ENST00000410427 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-791P-201ENST00000410467 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-705P-201ENST00000410601 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-402P-201ENST00000410678 103 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-1100P-201ENST00000410691 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-860P-201ENST00000410860 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-1217P-201ENST00000411276 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU6-785P-201ENST00000411324 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
RTP1P59025 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
RTP1P59025 RNU7-48P-201ENST00000458875 63 ntBASIC1.93□□□□□ -2.1
RTP1P59025 AC141846.1-201ENST00000568348 142 ntBASIC1.93□□□□□ -2.1
RTP1P59025 AC103810.7-201ENST00000607821 91 ntBASIC1.93□□□□□ -2.1
RTP1P59025 MIR6504-201ENST00000613520 61 ntBASIC1.93□□□□□ -2.1
RTP1P59025 U6.90-201ENST00000614007 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 U6.70-201ENST00000620287 104 ntBASIC1.93□□□□□ -2.1
RTP1P59025 Y_RNA.73-201ENST00000362910 113 ntBASIC1.92□□□□□ -2.1
RTP1P59025 Y_RNA.98-201ENST00000363109 102 ntBASIC1.92□□□□□ -2.1
RTP1P59025 SNORD116-10-201ENST00000363791 102 ntBASIC1.92□□□□□ -2.1
RTP1P59025 RNU6-392P-201ENST00000364926 101 ntBASIC1.92□□□□□ -2.1
RTP1P59025 SNORD116-22-201ENST00000384430 92 ntBASIC1.92□□□□□ -2.1
RTP1P59025 MIR548G-201ENST00000408442 89 ntBASIC1.92□□□□□ -2.1
RTP1P59025 RNA5SP237-201ENST00000410414 113 ntBASIC1.92□□□□□ -2.1
RTP1P59025 AC022137.1-201ENST00000483735 151 ntBASIC1.92□□□□□ -2.1
RTP1P59025 MIR4299-201ENST00000577899 72 ntBASIC1.92□□□□□ -2.1
RTP1P59025 AL662814.1-201ENST00000617364 121 ntBASIC1.92□□□□□ -2.1
RTP1P59025 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RTP1P59025 RNU6-1244P-201ENST00000363614 108 ntBASIC1.91□□□□□ -2.1
RTP1P59025 RNU6-219P-201ENST00000364728 107 ntBASIC1.91□□□□□ -2.1
RTP1P59025 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RTP1P59025 snoU13.25-201ENST00000458945 104 ntBASIC1.91□□□□□ -2.1
RTP1P59025 snoU13.2-201ENST00000459201 104 ntBASIC1.91□□□□□ -2.1
RTP1P59025 RNU6-267P-201ENST00000516714 103 ntBASIC1.91□□□□□ -2.1
RTP1P59025 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RTP1P59025 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.9□□□□□ -2.1
RTP1P59025 SNORA25.3-201ENST00000363205 127 ntBASIC1.9□□□□□ -2.11
RTP1P59025 Y_RNA.219-201ENST00000364232 113 ntBASIC1.9□□□□□ -2.11
RTP1P59025 SNORD48-201ENST00000364953 64 ntBASIC1.9□□□□□ -2.11
RTP1P59025 Y_RNA.567-201ENST00000384736 106 ntBASIC1.9□□□□□ -2.11
RTP1P59025 MIR7-2-201ENST00000384970 110 ntBASIC1.9□□□□□ -2.11
RTP1P59025 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RTP1P59025 HSPE1P24-201ENST00000450782 238 ntBASIC1.9□□□□□ -2.11
RTP1P59025 AL357312.1-201ENST00000603879 298 ntBASIC1.9□□□□□ -2.11
RTP1P59025 AL645939.4-201ENST00000604495 135 ntBASIC1.9□□□□□ -2.11
RTP1P59025 RNU6-90P-201ENST00000606352 106 ntBASIC1.9□□□□□ -2.11
RTP1P59025 GHRLOS.1-201ENST00000610995 70 ntBASIC1.9□□□□□ -2.11
RTP1P59025 MIR8074-201ENST00000615081 81 ntBASIC1.9□□□□□ -2.11
RTP1P59025 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RTP1P59025 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
RTP1P59025 SNORD78.1-201ENST00000390866 65 ntBASIC1.89□□□□□ -2.11
RTP1P59025 AC027119.1-201ENST00000440877 241 ntBASIC1.89□□□□□ -2.11
RTP1P59025 SPINT5P-201ENST00000448174 155 ntBASIC1.89□□□□□ -2.11
RTP1P59025 Y_RNA.685-201ENST00000516532 108 ntBASIC1.89□□□□□ -2.11
RTP1P59025 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms