Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 RNA5SP437-201ENST00000517249 129 ntBASIC3.05□□□□□ -1.92
PTPN5P54829 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
PTPN5P54829 ZNF658B-202ENST00000615961 3375 ntBASIC3.05□□□□□ -1.92
PTPN5P54829 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
PTPN5P54829 SNORA46-201ENST00000384762 135 ntBASIC3.04□□□□□ -1.92
PTPN5P54829 SCARNA21.1-201ENST00000515996 128 ntBASIC3.04□□□□□ -1.92
PTPN5P54829 MIR3938-201ENST00000582157 103 ntBASIC3.04□□□□□ -1.92
PTPN5P54829 MIR4506-201ENST00000584693 77 ntBASIC3.04□□□□□ -1.92
PTPN5P54829 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.04□□□□□ -1.92
PTPN5P54829 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTPN5P54829 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PTPN5P54829 SNORA16B-201ENST00000364674 135 ntBASIC3.03□□□□□ -1.92
PTPN5P54829 RNU6-1335P-201ENST00000365426 107 ntBASIC3.03□□□□□ -1.92
PTPN5P54829 MIR764-201ENST00000390811 85 ntBASIC3.03□□□□□ -1.92
PTPN5P54829 RN7SL20P-201ENST00000488827 297 ntBASIC3.03□□□□□ -1.92
PTPN5P54829 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTPN5P54829 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
PTPN5P54829 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PTPN5P54829 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTPN5P54829 AL596028.1-201ENST00000326971 197 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 RNU4-58P-201ENST00000363192 141 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 RNU6-668P-201ENST00000364180 107 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 RNU6-654P-201ENST00000364373 107 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 Y_RNA.258-201ENST00000364613 105 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 SNORD21-201ENST00000383953 95 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PTPN5P54829 SNORD100-201ENST00000408573 76 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 RNU6-1052P-201ENST00000411398 104 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 BX510359.4-201ENST00000423750 193 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 AC104389.3-201ENST00000445629 235 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 Z96811.1-201ENST00000445880 108 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 UQCRHP3-201ENST00000451503 251 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 RNU6-719P-201ENST00000516671 104 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 SUB1P4-201ENST00000566062 339 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 MIR4709-201ENST00000577272 72 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 MIR4491-201ENST00000581087 68 ntBASIC3.02□□□□□ -1.93
PTPN5P54829 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.02□□□□□ -1.93
PTPN5P54829 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPN5P54829 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTPN5P54829 AC073325.2-201ENST00000339545 159 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 RNU6-859P-201ENST00000362728 107 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 RNU6-382P-201ENST00000365181 106 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 Y_RNA.536-201ENST00000384621 113 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 MIR29C-201ENST00000385231 88 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 RNU6-1177P-201ENST00000391058 104 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 SNORA3.2-201ENST00000408221 125 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 MTND4LP1-201ENST00000446263 157 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.01□□□□□ -1.93
PTPN5P54829 SNORA25.16-201ENST00000516741 121 ntBASIC3.01□□□□□ -1.93
PTPN5P54829 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN5P54829 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTPN5P54829 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PTPN5P54829 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PTPN5P54829 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PTPN5P54829 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTPN5P54829 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PTPN5P54829 MIR520A-201ENST00000384862 85 ntBASIC3□□□□□ -1.93
PTPN5P54829 SNORD67-201ENST00000390833 111 ntBASIC3□□□□□ -1.93
PTPN5P54829 Y_RNA.588-201ENST00000391254 102 ntBASIC3□□□□□ -1.93
PTPN5P54829 MIR1302-7-201ENST00000408841 72 ntBASIC3□□□□□ -1.93
PTPN5P54829 RNU6-935P-201ENST00000410371 100 ntBASIC3□□□□□ -1.93
PTPN5P54829 AC244098.3-201ENST00000424803 96 ntBASIC3□□□□□ -1.93
PTPN5P54829 RNU6-274P-201ENST00000459566 107 ntBASIC3□□□□□ -1.93
PTPN5P54829 RN7SL633P-201ENST00000488974 297 ntBASIC3□□□□□ -1.93
PTPN5P54829 RNU6-122P-201ENST00000516818 107 ntBASIC3□□□□□ -1.93
PTPN5P54829 AP000942.3-201ENST00000603702 160 ntBASIC3□□□□□ -1.93
PTPN5P54829 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN5P54829 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN5P54829 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PTPN5P54829 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PTPN5P54829 RNU6-1165P-201ENST00000410119 107 ntBASIC2.99□□□□□ -1.93
PTPN5P54829 RN7SKP123-201ENST00000410732 291 ntBASIC2.99□□□□□ -1.93
PTPN5P54829 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN5P54829 Y_RNA.809-201ENST00000516058 95 ntBASIC2.99□□□□□ -1.93
PTPN5P54829 AC026271.5-201ENST00000577873 130 ntBASIC2.99□□□□□ -1.93
PTPN5P54829 AC046143.2-201ENST00000609789 160 ntBASIC2.99□□□□□ -1.93
PTPN5P54829 MIR4773-1-201ENST00000637203 78 ntBASIC2.99□□□□□ -1.93
PTPN5P54829 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PTPN5P54829 snoU13.27-201ENST00000459278 104 ntBASIC2.98□□□□□ -1.93
PTPN5P54829 RNA5SP137-201ENST00000516833 135 ntBASIC2.98□□□□□ -1.93
PTPN5P54829 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN5P54829 MIR6817-201ENST00000615588 66 ntBASIC2.98□□□□□ -1.93
PTPN5P54829 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.98□□□□□ -1.93
PTPN5P54829 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN5P54829 RNA5SP68-201ENST00000363885 119 ntBASIC2.97□□□□□ -1.93
PTPN5P54829 MIR451A-201ENST00000385059 72 ntBASIC2.97□□□□□ -1.93
PTPN5P54829 MT-TF-201ENST00000387314 71 ntBASIC2.97□□□□□ -1.93
PTPN5P54829 AL078603.1-201ENST00000603824 313 ntBASIC2.97□□□□□ -1.93
PTPN5P54829 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PTPN5P54829 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN5P54829 Y_RNA.379-201ENST00000365653 102 ntBASIC2.96□□□□□ -1.94
PTPN5P54829 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
PTPN5P54829 UBBP3-201ENST00000445497 241 ntBASIC2.96□□□□□ -1.94
PTPN5P54829 RNU7-26P-201ENST00000458980 63 ntBASIC2.96□□□□□ -1.94
PTPN5P54829 RNVU1-2-201ENST00000516326 135 ntBASIC2.96□□□□□ -1.94
PTPN5P54829 uc_338.6-201ENST00000613544 171 ntBASIC2.96□□□□□ -1.94
PTPN5P54829 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN5P54829 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PTPN5P54829 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.95□□□□□ -1.94
PTPN5P54829 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 270.6 ms