Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNU6-588P-201ENST00000410281 105 ntBASIC0.7□□□□□ -2.3
LBX1P52954 AC067940.1-201ENST00000458411 300 ntBASIC0.7□□□□□ -2.3
LBX1P52954 MIR4771-2-201ENST00000577758 74 ntBASIC0.7□□□□□ -2.3
LBX1P52954 MIR4771-1-201ENST00000582617 74 ntBASIC0.7□□□□□ -2.3
LBX1P52954 MIR4676-201ENST00000583078 72 ntBASIC0.7□□□□□ -2.3
LBX1P52954 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.7□□□□□ -2.3
LBX1P52954 AL136317.1-201ENST00000612653 226 ntBASIC0.7□□□□□ -2.3
LBX1P52954 SNORD115-2-201ENST00000362842 82 ntBASIC0.69□□□□□ -2.3
LBX1P52954 RNU4-16P-201ENST00000364737 141 ntBASIC0.69□□□□□ -2.3
LBX1P52954 SNORD115-20-201ENST00000365099 82 ntBASIC0.69□□□□□ -2.3
LBX1P52954 Y_RNA.555-201ENST00000384673 110 ntBASIC0.69□□□□□ -2.3
LBX1P52954 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
LBX1P52954 AC015818.7-201ENST00000428754 109 ntBASIC0.69□□□□□ -2.3
LBX1P52954 AC087499.7-201ENST00000441958 109 ntBASIC0.69□□□□□ -2.3
LBX1P52954 AP003327.1-201ENST00000529684 127 ntBASIC0.69□□□□□ -2.3
LBX1P52954 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.69□□□□□ -2.3
LBX1P52954 AC023932.2-201ENST00000603176 175 ntBASIC0.69□□□□□ -2.3
LBX1P52954 AC098479.1-201ENST00000609225 154 ntBASIC0.69□□□□□ -2.3
LBX1P52954 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.69□□□□□ -2.3
LBX1P52954 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.69□□□□□ -2.3
LBX1P52954 MIR6844-201ENST00000637122 62 ntBASIC0.69□□□□□ -2.3
LBX1P52954 MIR1-1-201ENST00000362147 71 ntBASIC0.68□□□□□ -2.3
LBX1P52954 Y_RNA.120-201ENST00000363304 110 ntBASIC0.68□□□□□ -2.3
LBX1P52954 RNU6-1130P-201ENST00000365434 107 ntBASIC0.68□□□□□ -2.3
LBX1P52954 SNORD99-201ENST00000408612 74 ntBASIC0.68□□□□□ -2.3
LBX1P52954 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
LBX1P52954 RNU7-185P-201ENST00000459215 60 ntBASIC0.68□□□□□ -2.3
LBX1P52954 RNU6-182P-201ENST00000516970 105 ntBASIC0.68□□□□□ -2.3
LBX1P52954 MIR3152-201ENST00000579801 74 ntBASIC0.68□□□□□ -2.3
LBX1P52954 SNORD92-201ENST00000585078 85 ntBASIC0.68□□□□□ -2.3
LBX1P52954 MTRNR2L2-201ENST00000604882 87 ntBASIC0.68□□□□□ -2.3
LBX1P52954 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
LBX1P52954 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
LBX1P52954 SNORA20-201ENST00000384662 132 ntBASIC0.67□□□□□ -2.3
LBX1P52954 MIR125B2-201ENST00000385128 89 ntBASIC0.67□□□□□ -2.3
LBX1P52954 AL603914.1-201ENST00000401964 204 ntBASIC0.67□□□□□ -2.3
LBX1P52954 RNU7-56P-201ENST00000458744 62 ntBASIC0.67□□□□□ -2.3
LBX1P52954 RNU6-1212P-201ENST00000517023 104 ntBASIC0.67□□□□□ -2.3
LBX1P52954 AC141846.1-201ENST00000568348 142 ntBASIC0.67□□□□□ -2.3
LBX1P52954 Y_RNA.778-201ENST00000620203 90 ntBASIC0.67□□□□□ -2.3
LBX1P52954 Y_RNA.42-201ENST00000362660 108 ntBASIC0.66□□□□□ -2.3
LBX1P52954 Y_RNA.171-201ENST00000363760 102 ntBASIC0.66□□□□□ -2.3
LBX1P52954 AC108059.2-201ENST00000434626 151 ntBASIC0.66□□□□□ -2.3
LBX1P52954 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.66□□□□□ -2.3
LBX1P52954 Y_RNA.686-201ENST00000516548 134 ntBASIC0.66□□□□□ -2.3
LBX1P52954 RNU7-70P-201ENST00000516941 66 ntBASIC0.66□□□□□ -2.3
LBX1P52954 RNU7-35P-201ENST00000517174 62 ntBASIC0.66□□□□□ -2.3
LBX1P52954 MIR3671-201ENST00000580455 88 ntBASIC0.66□□□□□ -2.3
LBX1P52954 AC090425.1-201ENST00000610007 140 ntBASIC0.66□□□□□ -2.3
LBX1P52954 MIR8066-201ENST00000617280 78 ntBASIC0.66□□□□□ -2.3
LBX1P52954 RNU6-508P-201ENST00000363231 103 ntBASIC0.65□□□□□ -2.31
LBX1P52954 RNU4-11P-201ENST00000365287 132 ntBASIC0.65□□□□□ -2.31
LBX1P52954 RNU6-949P-201ENST00000384040 107 ntBASIC0.65□□□□□ -2.31
LBX1P52954 Y_RNA.470-201ENST00000384307 117 ntBASIC0.65□□□□□ -2.31
LBX1P52954 RNU6-1086P-201ENST00000410930 100 ntBASIC0.65□□□□□ -2.31
LBX1P52954 SNX3P1X-201ENST00000414887 175 ntBASIC0.65□□□□□ -2.31
LBX1P52954 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
LBX1P52954 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
LBX1P52954 MIR1270-201ENST00000459320 83 ntBASIC0.65□□□□□ -2.31
LBX1P52954 RNU2-35P-201ENST00000516446 142 ntBASIC0.65□□□□□ -2.31
LBX1P52954 AC112693.2-201ENST00000556538 232 ntBASIC0.65□□□□□ -2.31
LBX1P52954 Y_RNA.150-201ENST00000363562 102 ntBASIC0.64□□□□□ -2.31
LBX1P52954 Y_RNA.180-201ENST00000363867 113 ntBASIC0.64□□□□□ -2.31
LBX1P52954 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
LBX1P52954 U8.15-201ENST00000390947 134 ntBASIC0.64□□□□□ -2.31
LBX1P52954 Y_RNA.584-201ENST00000391090 114 ntBASIC0.64□□□□□ -2.31
LBX1P52954 RNU1-119P-201ENST00000391122 165 ntBASIC0.64□□□□□ -2.31
LBX1P52954 Y_RNA.588-201ENST00000391254 102 ntBASIC0.64□□□□□ -2.31
LBX1P52954 MIR1257-201ENST00000408490 117 ntBASIC0.64□□□□□ -2.31
LBX1P52954 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
LBX1P52954 MIR3144-201ENST00000579460 79 ntBASIC0.64□□□□□ -2.31
LBX1P52954 AC090897.1-201ENST00000580909 226 ntBASIC0.64□□□□□ -2.31
LBX1P52954 MIR4305-201ENST00000583252 102 ntBASIC0.64□□□□□ -2.31
LBX1P52954 AC008608.1-201ENST00000603910 127 ntBASIC0.64□□□□□ -2.31
LBX1P52954 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
LBX1P52954 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
LBX1P52954 RNY1P13-201ENST00000365030 105 ntBASIC0.63□□□□□ -2.31
LBX1P52954 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
LBX1P52954 RNU6-1126P-201ENST00000384002 107 ntBASIC0.63□□□□□ -2.31
LBX1P52954 RNU6-804P-201ENST00000384286 107 ntBASIC0.63□□□□□ -2.31
LBX1P52954 SNORA18-201ENST00000384416 132 ntBASIC0.63□□□□□ -2.31
LBX1P52954 MIR520F-201ENST00000384824 87 ntBASIC0.63□□□□□ -2.31
LBX1P52954 MIR520H-201ENST00000385126 88 ntBASIC0.63□□□□□ -2.31
LBX1P52954 MIR938-201ENST00000401216 83 ntBASIC0.63□□□□□ -2.31
LBX1P52954 SNORD100-201ENST00000408573 76 ntBASIC0.63□□□□□ -2.31
LBX1P52954 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.63□□□□□ -2.31
LBX1P52954 MTATP6P21-201ENST00000440681 189 ntBASIC0.63□□□□□ -2.31
LBX1P52954 RNU6-977P-201ENST00000516411 103 ntBASIC0.63□□□□□ -2.31
LBX1P52954 RNU6-309P-201ENST00000364573 106 ntBASIC0.62□□□□□ -2.31
LBX1P52954 RNU6-449P-201ENST00000383914 107 ntBASIC0.62□□□□□ -2.31
LBX1P52954 RNU6-240P-201ENST00000516098 97 ntBASIC0.62□□□□□ -2.31
LBX1P52954 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
LBX1P52954 Y_RNA.35-201ENST00000362601 101 ntBASIC0.61□□□□□ -2.31
LBX1P52954 RNU4-67P-201ENST00000364569 141 ntBASIC0.61□□□□□ -2.31
LBX1P52954 RNU6-690P-201ENST00000365242 106 ntBASIC0.61□□□□□ -2.31
LBX1P52954 Y_RNA.398-201ENST00000383952 99 ntBASIC0.61□□□□□ -2.31
LBX1P52954 SNORD116-18-201ENST00000383961 92 ntBASIC0.61□□□□□ -2.31
LBX1P52954 Y_RNA.464-201ENST00000384282 110 ntBASIC0.61□□□□□ -2.31
LBX1P52954 MIR569-201ENST00000385228 96 ntBASIC0.61□□□□□ -2.31
LBX1P52954 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms