Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 Y_RNA.107-201ENST00000363190 121 ntBASIC1.38□□□□□ -2.19
MMP13P45452 RNU6-654P-201ENST00000364373 107 ntBASIC1.38□□□□□ -2.19
MMP13P45452 SNORD73B-201ENST00000364394 72 ntBASIC1.38□□□□□ -2.19
MMP13P45452 Y_RNA.290-201ENST00000364879 114 ntBASIC1.38□□□□□ -2.19
MMP13P45452 RNU6-294P-201ENST00000364999 102 ntBASIC1.38□□□□□ -2.19
MMP13P45452 Y_RNA.467-201ENST00000384297 102 ntBASIC1.38□□□□□ -2.19
MMP13P45452 SNORD77B-201ENST00000391112 67 ntBASIC1.38□□□□□ -2.19
MMP13P45452 RNU6-1086P-201ENST00000410930 100 ntBASIC1.38□□□□□ -2.19
MMP13P45452 AC096949.1-201ENST00000412047 152 ntBASIC1.38□□□□□ -2.19
MMP13P45452 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.38□□□□□ -2.19
MMP13P45452 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
MMP13P45452 RNU6-947P-201ENST00000516264 106 ntBASIC1.38□□□□□ -2.19
MMP13P45452 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.38□□□□□ -2.19
MMP13P45452 MIR376B-201ENST00000614515 100 ntBASIC1.38□□□□□ -2.19
MMP13P45452 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
MMP13P45452 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
MMP13P45452 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
MMP13P45452 RNU4-36P-201ENST00000364294 144 ntBASIC1.37□□□□□ -2.19
MMP13P45452 Y_RNA.377-201ENST00000365644 108 ntBASIC1.37□□□□□ -2.19
MMP13P45452 SNORD38B-201ENST00000384690 67 ntBASIC1.37□□□□□ -2.19
MMP13P45452 RNA5SP95-201ENST00000410319 137 ntBASIC1.37□□□□□ -2.19
MMP13P45452 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
MMP13P45452 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
MMP13P45452 RNU6-1018P-201ENST00000516577 106 ntBASIC1.37□□□□□ -2.19
MMP13P45452 AC141846.1-201ENST00000568348 142 ntBASIC1.37□□□□□ -2.19
MMP13P45452 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.37□□□□□ -2.19
MMP13P45452 AC020891.4-201ENST00000605745 93 ntBASIC1.37□□□□□ -2.19
MMP13P45452 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
MMP13P45452 AL442128.1-201ENST00000615151 90 ntBASIC1.37□□□□□ -2.19
MMP13P45452 SNORD38B-202ENST00000625943 69 ntBASIC1.37□□□□□ -2.19
MMP13P45452 MIR6516-201ENST00000630554 81 ntBASIC1.37□□□□□ -2.19
MMP13P45452 Y_RNA.388-201ENST00000383919 113 ntBASIC1.36□□□□□ -2.19
MMP13P45452 Y_RNA.448-201ENST00000384185 108 ntBASIC1.36□□□□□ -2.19
MMP13P45452 MIR563-201ENST00000385080 79 ntBASIC1.36□□□□□ -2.19
MMP13P45452 BTF3P4-201ENST00000418852 495 ntBASIC1.36□□□□□ -2.19
MMP13P45452 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
MMP13P45452 AC108729.3-201ENST00000513484 108 ntBASIC1.36□□□□□ -2.19
MMP13P45452 RNU6-162P-201ENST00000516228 103 ntBASIC1.36□□□□□ -2.19
MMP13P45452 RNU6-844P-201ENST00000517175 102 ntBASIC1.36□□□□□ -2.19
MMP13P45452 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
MMP13P45452 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
MMP13P45452 AL662814.1-201ENST00000617364 121 ntBASIC1.36□□□□□ -2.19
MMP13P45452 MIR378A-201ENST00000362177 66 ntBASIC1.35□□□□□ -2.19
MMP13P45452 RNA5SP48-201ENST00000363969 126 ntBASIC1.35□□□□□ -2.19
MMP13P45452 RNU6-1163P-201ENST00000364516 107 ntBASIC1.35□□□□□ -2.19
MMP13P45452 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
MMP13P45452 RNU6-205P-201ENST00000390858 107 ntBASIC1.35□□□□□ -2.19
MMP13P45452 AC109327.2-201ENST00000448339 378 ntBASIC1.35□□□□□ -2.19
MMP13P45452 RNU1-123P-201ENST00000458950 160 ntBASIC1.35□□□□□ -2.19
MMP13P45452 snoU13.2-201ENST00000459201 104 ntBASIC1.35□□□□□ -2.19
MMP13P45452 MIR3937-201ENST00000580135 106 ntBASIC1.35□□□□□ -2.19
MMP13P45452 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.35□□□□□ -2.19
MMP13P45452 AL512310.12-203ENST00000640543 90 ntBASIC1.35□□□□□ -2.19
MMP13P45452 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
MMP13P45452 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
MMP13P45452 MIR30D-201ENST00000362283 70 ntBASIC1.34□□□□□ -2.19
MMP13P45452 Y_RNA.95-201ENST00000363079 95 ntBASIC1.34□□□□□ -2.19
MMP13P45452 Y_RNA.354-201ENST00000365448 111 ntBASIC1.34□□□□□ -2.19
MMP13P45452 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
MMP13P45452 MIR588-201ENST00000384900 83 ntBASIC1.34□□□□□ -2.19
MMP13P45452 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.34□□□□□ -2.19
MMP13P45452 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
MMP13P45452 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
MMP13P45452 U7.3-201ENST00000616123 62 ntBASIC1.34□□□□□ -2.19
MMP13P45452 SNORA7.1-201ENST00000363750 139 ntBASIC1.33□□□□□ -2.2
MMP13P45452 Y_RNA.190-201ENST00000363964 101 ntBASIC1.33□□□□□ -2.2
MMP13P45452 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
MMP13P45452 snoU13.21-201ENST00000459368 105 ntBASIC1.33□□□□□ -2.2
MMP13P45452 MIR3664-201ENST00000579074 99 ntBASIC1.33□□□□□ -2.2
MMP13P45452 AC062037.1-201ENST00000605302 128 ntBASIC1.33□□□□□ -2.2
MMP13P45452 RNA5SP264-201ENST00000363115 107 ntBASIC1.32□□□□□ -2.2
MMP13P45452 SNORD114-10-201ENST00000363409 72 ntBASIC1.32□□□□□ -2.2
MMP13P45452 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
MMP13P45452 RPL30P7-201ENST00000479312 323 ntBASIC1.32□□□□□ -2.2
MMP13P45452 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
MMP13P45452 RNU6-237P-201ENST00000515985 71 ntBASIC1.32□□□□□ -2.2
MMP13P45452 Y_RNA.659-201ENST00000515994 113 ntBASIC1.32□□□□□ -2.2
MMP13P45452 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
MMP13P45452 AL512310.8-201ENST00000550183 120 ntBASIC1.32□□□□□ -2.2
MMP13P45452 AL357312.1-201ENST00000603879 298 ntBASIC1.32□□□□□ -2.2
MMP13P45452 RNY1P10-201ENST00000363268 113 ntBASIC1.31□□□□□ -2.2
MMP13P45452 RNU6-949P-201ENST00000384040 107 ntBASIC1.31□□□□□ -2.2
MMP13P45452 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
MMP13P45452 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
MMP13P45452 U8.15-201ENST00000390947 134 ntBASIC1.31□□□□□ -2.2
MMP13P45452 RNU7-48P-201ENST00000458875 63 ntBASIC1.31□□□□□ -2.2
MMP13P45452 AL133373.1-201ENST00000497098 94 ntBASIC1.31□□□□□ -2.2
MMP13P45452 RNU6-86P-201ENST00000606534 107 ntBASIC1.31□□□□□ -2.2
MMP13P45452 MIR103A2-201ENST00000362154 78 ntBASIC1.3□□□□□ -2.2
MMP13P45452 SNORD45B-201ENST00000364617 72 ntBASIC1.3□□□□□ -2.2
MMP13P45452 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
MMP13P45452 Y_RNA.593-201ENST00000410292 98 ntBASIC1.3□□□□□ -2.2
MMP13P45452 RNY4P29-201ENST00000410801 97 ntBASIC1.3□□□□□ -2.2
MMP13P45452 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
MMP13P45452 AC026421.1-201ENST00000519101 163 ntBASIC1.3□□□□□ -2.2
MMP13P45452 AC138749.4-201ENST00000563970 127 ntBASIC1.3□□□□□ -2.2
MMP13P45452 MIR3124-201ENST00000582636 67 ntBASIC1.3□□□□□ -2.2
MMP13P45452 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
MMP13P45452 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.3□□□□□ -2.2
MMP13P45452 MIR2052-201ENST00000636055 55 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms