Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RNU7-6P-201ENST00000516845 62 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 AL359881.1-201ENST00000602916 267 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 MIR6767-201ENST00000637302 66 ntBASIC1.15□□□□□ -2.23
HOXD12P35452 SNORA22C-201ENST00000384614 134 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 MIR563-201ENST00000385080 79 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 RNU2-51P-201ENST00000410708 197 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 RNU6-1086P-201ENST00000410930 100 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 snoU13.21-201ENST00000459368 105 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 RNU7-79P-201ENST00000516082 62 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 uc_338.6-201ENST00000613544 171 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 AL662814.1-201ENST00000617364 121 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 U6.95-201ENST00000636931 70 ntBASIC1.14□□□□□ -2.23
HOXD12P35452 SNORD114-27-201ENST00000363766 70 ntBASIC1.13□□□□□ -2.23
HOXD12P35452 SNORA22-201ENST00000383907 134 ntBASIC1.13□□□□□ -2.23
HOXD12P35452 RNU7-35P-201ENST00000517174 62 ntBASIC1.13□□□□□ -2.23
HOXD12P35452 AC141846.1-201ENST00000568348 142 ntBASIC1.13□□□□□ -2.23
HOXD12P35452 MIR3163-201ENST00000581592 73 ntBASIC1.13□□□□□ -2.23
HOXD12P35452 RNU6-94P-201ENST00000607728 107 ntBASIC1.13□□□□□ -2.23
HOXD12P35452 PVT1_3.1-201ENST00000620853 95 ntBASIC1.13□□□□□ -2.23
HOXD12P35452 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HOXD12P35452 RNA5SP205-201ENST00000364653 136 ntBASIC1.12□□□□□ -2.23
HOXD12P35452 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.12□□□□□ -2.23
HOXD12P35452 RNU6-735P-201ENST00000410612 107 ntBASIC1.12□□□□□ -2.23
HOXD12P35452 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HOXD12P35452 MIR30D-201ENST00000362283 70 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 RNU6-934P-201ENST00000365154 107 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 RNU6-1081P-201ENST00000384537 107 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 Y_RNA.563-201ENST00000384707 108 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 SNORD77B-201ENST00000391112 67 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 RNU6-994P-201ENST00000410507 111 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 SNORD83.1-201ENST00000411362 77 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 MIR18B-201ENST00000454574 71 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 Y_RNA.649-201ENST00000459077 103 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 MIR1270-201ENST00000459320 83 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
HOXD12P35452 SNORD33.1-201ENST00000516213 88 ntBASIC1.11□□□□□ -2.23
HOXD12P35452 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HOXD12P35452 RNY4P6-201ENST00000363667 96 ntBASIC1.1□□□□□ -2.23
HOXD12P35452 RNY1P13-201ENST00000365030 105 ntBASIC1.1□□□□□ -2.23
HOXD12P35452 MIR548A3-201ENST00000385297 97 ntBASIC1.1□□□□□ -2.23
HOXD12P35452 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.1□□□□□ -2.23
HOXD12P35452 RPL39P25-201ENST00000449384 154 ntBASIC1.1□□□□□ -2.23
HOXD12P35452 Y_RNA.353-201ENST00000365440 108 ntBASIC1.09□□□□□ -2.23
HOXD12P35452 MIR548A1-201ENST00000385041 97 ntBASIC1.09□□□□□ -2.23
HOXD12P35452 MT-TF-201ENST00000387314 71 ntBASIC1.09□□□□□ -2.23
HOXD12P35452 MIR548I2-201ENST00000408348 149 ntBASIC1.09□□□□□ -2.23
HOXD12P35452 AL670379.3-201ENST00000605040 251 ntBASIC1.09□□□□□ -2.23
HOXD12P35452 AC087741.2-201ENST00000619415 172 ntBASIC1.09□□□□□ -2.23
HOXD12P35452 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
HOXD12P35452 Y_RNA.36-201ENST00000362602 112 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 RNU6-949P-201ENST00000384040 107 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 MIR548D2-201ENST00000384955 97 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 MTND5P34-201ENST00000568888 325 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 MIR4771-2-201ENST00000577758 74 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 MIR548AI-201ENST00000579940 88 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 MIR4771-1-201ENST00000582617 74 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 FAM71BP1-201ENST00000604431 523 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 AL589743.1-201ENST00000551932 2712 ntBASIC1.08□□□□□ -2.24
HOXD12P35452 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 AC015818.7-201ENST00000428754 109 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 AC087499.7-201ENST00000441958 109 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 AC067940.1-201ENST00000458411 300 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 SNORD124-201ENST00000459577 104 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 SNORD67.1-201ENST00000516618 108 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 MIR6779-201ENST00000617283 64 ntBASIC1.07□□□□□ -2.24
HOXD12P35452 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HOXD12P35452 AC023934.1-201ENST00000574529 2389 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 RNU6-616P-201ENST00000384353 107 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 U8.15-201ENST00000390947 134 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 RPS26P5-201ENST00000418544 335 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 RNU7-185P-201ENST00000459215 60 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 PDCD5P2-201ENST00000507570 312 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 AC007012.1-201ENST00000567192 175 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 Y_RNA.773-201ENST00000607168 90 ntBASIC1.06□□□□□ -2.24
HOXD12P35452 MIR1-1-201ENST00000362147 71 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 RNU1-36P-201ENST00000365130 165 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 Y_RNA.344-201ENST00000365381 112 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 MIR100-201ENST00000385259 80 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 SNORD93-201ENST00000408813 74 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 RNU7-137P-201ENST00000516788 62 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 AC105081.1-201ENST00000617727 106 ntBASIC1.05□□□□□ -2.24
HOXD12P35452 SNORD115-19-201ENST00000363098 82 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 SNORD115-18-201ENST00000363293 82 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 SNORD114-10-201ENST00000363409 72 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 SNORD115-17-201ENST00000364612 82 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 Y_RNA.291-201ENST00000364886 113 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 RNU6-1144P-201ENST00000384247 104 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 RNU6-1064P-201ENST00000410626 104 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 FABP5P4-201ENST00000437203 171 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 AC020891.4-201ENST00000605745 93 ntBASIC1.04□□□□□ -2.24
HOXD12P35452 Y_RNA.362-201ENST00000365518 110 ntBASIC1.03□□□□□ -2.24
HOXD12P35452 RNU6-1056P-201ENST00000383996 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms