Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 Y_RNA.470-201ENST00000384307 117 ntBASIC0.05□□□□□ -2.4
CTNNA1P35221 RNY1P4-201ENST00000384595 115 ntBASIC0.05□□□□□ -2.4
CTNNA1P35221 RNU6-1011P-201ENST00000384668 107 ntBASIC0.05□□□□□ -2.4
CTNNA1P35221 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.05□□□□□ -2.4
CTNNA1P35221 MIR3149-201ENST00000584629 83 ntBASIC0.05□□□□□ -2.4
CTNNA1P35221 U6.106-201ENST00000636360 105 ntBASIC0.05□□□□□ -2.4
CTNNA1P35221 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
CTNNA1P35221 Y_RNA.65-201ENST00000362846 100 ntBASIC0.04□□□□□ -2.4
CTNNA1P35221 Y_RNA.120-201ENST00000363304 110 ntBASIC0.04□□□□□ -2.4
CTNNA1P35221 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
CTNNA1P35221 MIR1273G-201ENST00000577677 100 ntBASIC0.04□□□□□ -2.4
CTNNA1P35221 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
CTNNA1P35221 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
CTNNA1P35221 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
CTNNA1P35221 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
CTNNA1P35221 RNA5SP133-201ENST00000363368 119 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 RNU4-67P-201ENST00000364569 141 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 Y_RNA.521-201ENST00000384560 114 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 RNU6-918P-201ENST00000391219 106 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 RNU6-1023P-201ENST00000516137 106 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 RNA5SP33-201ENST00000516687 98 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 RNU7-137P-201ENST00000516788 62 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.03□□□□□ -2.4
CTNNA1P35221 Y_RNA.357-201ENST00000365487 109 ntBASIC0.02□□□□□ -2.41
CTNNA1P35221 Y_RNA.362-201ENST00000365518 110 ntBASIC0.02□□□□□ -2.41
CTNNA1P35221 Y_RNA.673-201ENST00000516306 88 ntBASIC0.02□□□□□ -2.41
CTNNA1P35221 RNU6-531P-201ENST00000516694 104 ntBASIC0.02□□□□□ -2.41
CTNNA1P35221 DEFB131E-201ENST00000532329 154 ntBASIC0.02□□□□□ -2.41
CTNNA1P35221 AC062037.2-201ENST00000610137 73 ntBASIC0.02□□□□□ -2.41
CTNNA1P35221 SNORD114-10-201ENST00000363409 72 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 RNU6-690P-201ENST00000365242 106 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 Y_RNA.366-201ENST00000365540 102 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 RNU6-1336P-201ENST00000383886 109 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 RNU6-768P-201ENST00000384683 107 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 MIR568-201ENST00000385036 95 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 AC244505.6-201ENST00000452829 130 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 AC107027.2-201ENST00000512197 115 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 AC138749.4-201ENST00000563970 127 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 MIR4305-201ENST00000583252 102 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 U6.109-201ENST00000636749 87 ntBASIC0.01□□□□□ -2.41
CTNNA1P35221 MIR411-201ENST00000362239 96 ntBASIC0□□□□□ -2.41
CTNNA1P35221 Y_RNA.56-201ENST00000362798 112 ntBASIC0□□□□□ -2.41
CTNNA1P35221 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
CTNNA1P35221 RNU6-312P-201ENST00000364629 107 ntBASIC0□□□□□ -2.41
CTNNA1P35221 Y_RNA.477-201ENST00000384352 108 ntBASIC0□□□□□ -2.41
CTNNA1P35221 Y_RNA.531-201ENST00000384589 121 ntBASIC0□□□□□ -2.41
CTNNA1P35221 SNORA75.5-201ENST00000391291 81 ntBASIC0□□□□□ -2.41
CTNNA1P35221 MTATP6P21-201ENST00000440681 189 ntBASIC0□□□□□ -2.41
CTNNA1P35221 MIR3128-201ENST00000581957 66 ntBASIC0□□□□□ -2.41
CTNNA1P35221 MIR548AE2-201ENST00000583456 67 ntBASIC0□□□□□ -2.41
CTNNA1P35221 PVT1_3.1-201ENST00000620853 95 ntBASIC0□□□□□ -2.41
CTNNA1P35221 MIR101-2-201ENST00000362195 79 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 MIR330-201ENST00000362196 94 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 RNU6-694P-201ENST00000364071 147 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 RNA5SP245-201ENST00000364239 121 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 RNU6-818P-201ENST00000364837 108 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 RNU6-327P-201ENST00000516270 127 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 SNORD67.1-201ENST00000516618 108 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
CTNNA1P35221 SNORA63.5-201ENST00000363548 123 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 RNY1P2-201ENST00000364820 117 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 RNA5SP128-201ENST00000365305 116 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 SNORA32-201ENST00000384072 121 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 MIR760-201ENST00000390220 80 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 RNA5SP63-201ENST00000391225 112 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 RNU2-35P-201ENST00000516446 142 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 MIR3646-201ENST00000578301 84 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 MIR4743-201ENST00000584576 69 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 AL359881.1-201ENST00000602916 267 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 RNU1-29P-201ENST00000606574 126 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 MIR8087-201ENST00000612745 78 ntBASIC-0.02□□□□□ -2.41
CTNNA1P35221 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 RNU6-702P-201ENST00000364982 107 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 RNU6-127P-201ENST00000390897 107 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 RNU6-111P-201ENST00000517179 105 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 AC138869.1-201ENST00000568623 124 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 U4.1-201ENST00000620349 87 ntBASIC-0.03□□□□□ -2.41
CTNNA1P35221 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.04□□□□□ -2.42
CTNNA1P35221 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.04□□□□□ -2.42
CTNNA1P35221 RNU6-726P-201ENST00000364680 107 ntBASIC-0.04□□□□□ -2.42
CTNNA1P35221 SNORA20.1-201ENST00000364790 130 ntBASIC-0.04□□□□□ -2.42
CTNNA1P35221 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.04□□□□□ -2.42
CTNNA1P35221 SNORA2A-201ENST00000383885 135 ntBASIC-0.04□□□□□ -2.42
CTNNA1P35221 RNU6-429P-201ENST00000384582 108 ntBASIC-0.04□□□□□ -2.42
CTNNA1P35221 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms