Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 MT-TF-201ENST00000387314 71 ntBASIC3.2□□□□□ -1.9
CHGAP10645 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CHGAP10645 AC087499.7-201ENST00000441958 109 ntBASIC3.2□□□□□ -1.9
CHGAP10645 RNU6-850P-201ENST00000516934 103 ntBASIC3.2□□□□□ -1.9
CHGAP10645 MIR4713-201ENST00000582691 75 ntBASIC3.2□□□□□ -1.9
CHGAP10645 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.2□□□□□ -1.9
CHGAP10645 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.2□□□□□ -1.9
CHGAP10645 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHGAP10645 Y_RNA.118-201ENST00000363300 101 ntBASIC3.19□□□□□ -1.9
CHGAP10645 Y_RNA.119-201ENST00000363301 96 ntBASIC3.19□□□□□ -1.9
CHGAP10645 MIR1236-201ENST00000408340 102 ntBASIC3.19□□□□□ -1.9
CHGAP10645 RNU7-62P-201ENST00000458856 62 ntBASIC3.19□□□□□ -1.9
CHGAP10645 MIR219B-201ENST00000637023 88 ntBASIC3.19□□□□□ -1.9
CHGAP10645 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHGAP10645 RNU4-83P-201ENST00000410863 133 ntBASIC3.18□□□□□ -1.9
CHGAP10645 RPL30P7-201ENST00000479312 323 ntBASIC3.18□□□□□ -1.9
CHGAP10645 AP003716.2-201ENST00000528260 108 ntBASIC3.18□□□□□ -1.9
CHGAP10645 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHGAP10645 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHGAP10645 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHGAP10645 SNORD4B-201ENST00000459083 72 ntBASIC3.17□□□□□ -1.9
CHGAP10645 RPL23AP42-201ENST00000471152 471 ntBASIC3.17□□□□□ -1.9
CHGAP10645 RNU6-947P-201ENST00000516264 106 ntBASIC3.17□□□□□ -1.9
CHGAP10645 AC140658.3-201ENST00000567603 271 ntBASIC3.17□□□□□ -1.9
CHGAP10645 AC131280.1-202ENST00000624067 4211 ntBASIC3.17□□□□□ -1.9
CHGAP10645 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.17□□□□□ -1.9
CHGAP10645 MIR377-201ENST00000362145 69 ntBASIC3.16□□□□□ -1.9
CHGAP10645 Y_RNA.94-201ENST00000363068 106 ntBASIC3.16□□□□□ -1.9
CHGAP10645 SNORA16B-201ENST00000364674 135 ntBASIC3.16□□□□□ -1.9
CHGAP10645 RNU6-205P-201ENST00000390858 107 ntBASIC3.16□□□□□ -1.9
CHGAP10645 snoU13.25-201ENST00000458945 104 ntBASIC3.16□□□□□ -1.9
CHGAP10645 RNU6-1053P-201ENST00000515930 101 ntBASIC3.16□□□□□ -1.9
CHGAP10645 AC121758.2-201ENST00000553271 193 ntBASIC3.16□□□□□ -1.9
CHGAP10645 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHGAP10645 AC080100.1-201ENST00000624239 5356 ntBASIC3.15□□□□□ -1.9
CHGAP10645 MIR4498-201ENST00000577599 66 ntBASIC3.15□□□□□ -1.91
CHGAP10645 MIR4287-201ENST00000579398 78 ntBASIC3.15□□□□□ -1.91
CHGAP10645 MIR4781-201ENST00000585250 76 ntBASIC3.15□□□□□ -1.91
CHGAP10645 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHGAP10645 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CHGAP10645 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CHGAP10645 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CHGAP10645 Y_RNA.648-201ENST00000459455 110 ntBASIC3.14□□□□□ -1.91
CHGAP10645 MIR6516-201ENST00000630554 81 ntBASIC3.14□□□□□ -1.91
CHGAP10645 RNU6-776P-201ENST00000364403 104 ntBASIC3.13□□□□□ -1.91
CHGAP10645 RNU6-1022P-201ENST00000365049 104 ntBASIC3.13□□□□□ -1.91
CHGAP10645 Y_RNA.508-201ENST00000384502 114 ntBASIC3.13□□□□□ -1.91
CHGAP10645 BX276092.1-201ENST00000427368 251 ntBASIC3.13□□□□□ -1.91
CHGAP10645 RNU6-295P-201ENST00000516901 104 ntBASIC3.13□□□□□ -1.91
CHGAP10645 MIR4712-201ENST00000583750 82 ntBASIC3.13□□□□□ -1.91
CHGAP10645 MIR6132-201ENST00000622083 109 ntBASIC3.13□□□□□ -1.91
CHGAP10645 AL596028.1-201ENST00000326971 197 ntBASIC3.12□□□□□ -1.91
CHGAP10645 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHGAP10645 MIR1185-1-201ENST00000408598 86 ntBASIC3.11□□□□□ -1.91
CHGAP10645 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHGAP10645 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHGAP10645 RNA5SP264-201ENST00000363115 107 ntBASIC3.1□□□□□ -1.91
CHGAP10645 AC245517.4-201ENST00000448601 281 ntBASIC3.1□□□□□ -1.91
CHGAP10645 RNA5SP200-201ENST00000516360 103 ntBASIC3.1□□□□□ -1.91
CHGAP10645 MIR103A2-201ENST00000362154 78 ntBASIC3.09□□□□□ -1.91
CHGAP10645 RNU4-32P-201ENST00000363404 141 ntBASIC3.09□□□□□ -1.91
CHGAP10645 RNA5SP393-201ENST00000363423 117 ntBASIC3.09□□□□□ -1.91
CHGAP10645 MIR18B-201ENST00000454574 71 ntBASIC3.09□□□□□ -1.91
CHGAP10645 MIR8063-201ENST00000621930 81 ntBASIC3.09□□□□□ -1.91
CHGAP10645 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHGAP10645 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CHGAP10645 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHGAP10645 AL359851.1-201ENST00000569460 4997 ntBASIC3.08□□□□□ -1.92
CHGAP10645 RNU6-580P-201ENST00000365159 107 ntBASIC3.08□□□□□ -1.92
CHGAP10645 SNORA72.6-201ENST00000384520 129 ntBASIC3.08□□□□□ -1.92
CHGAP10645 U8.13-201ENST00000390842 128 ntBASIC3.08□□□□□ -1.92
CHGAP10645 snoU13.9-201ENST00000458927 103 ntBASIC3.08□□□□□ -1.92
CHGAP10645 SNORA25.13-201ENST00000516395 103 ntBASIC3.08□□□□□ -1.92
CHGAP10645 RNU7-153P-201ENST00000516455 62 ntBASIC3.08□□□□□ -1.92
CHGAP10645 MIR4299-201ENST00000577899 72 ntBASIC3.08□□□□□ -1.92
CHGAP10645 RNU6-53P-201ENST00000365367 106 ntBASIC3.07□□□□□ -1.92
CHGAP10645 Y_RNA.355-201ENST00000365462 98 ntBASIC3.07□□□□□ -1.92
CHGAP10645 RNU7-85P-201ENST00000458851 63 ntBASIC3.07□□□□□ -1.92
CHGAP10645 SNRPGP19-201ENST00000603826 189 ntBASIC3.07□□□□□ -1.92
CHGAP10645 Y_RNA.783-201ENST00000613546 102 ntBASIC3.07□□□□□ -1.92
CHGAP10645 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CHGAP10645 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
CHGAP10645 RNU6-315P-201ENST00000362666 107 ntBASIC3.06□□□□□ -1.92
CHGAP10645 SNORD33-201ENST00000362761 85 ntBASIC3.06□□□□□ -1.92
CHGAP10645 RNU1-17P-201ENST00000363022 152 ntBASIC3.06□□□□□ -1.92
CHGAP10645 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.06□□□□□ -1.92
CHGAP10645 RNU4-58P-201ENST00000363192 141 ntBASIC3.05□□□□□ -1.92
CHGAP10645 RNU6-1254P-201ENST00000391266 104 ntBASIC3.05□□□□□ -1.92
CHGAP10645 MIR4446-201ENST00000578505 67 ntBASIC3.05□□□□□ -1.92
CHGAP10645 MIR4491-201ENST00000581087 68 ntBASIC3.05□□□□□ -1.92
CHGAP10645 MIR6845-201ENST00000613182 61 ntBASIC3.05□□□□□ -1.92
CHGAP10645 uc_338.6-201ENST00000613544 171 ntBASIC3.05□□□□□ -1.92
CHGAP10645 MIR302D-201ENST00000362275 68 ntBASIC3.04□□□□□ -1.92
CHGAP10645 RNU6-129P-201ENST00000391022 107 ntBASIC3.04□□□□□ -1.92
CHGAP10645 AC103810.8-201ENST00000607347 118 ntBASIC3.04□□□□□ -1.92
CHGAP10645 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHGAP10645 SNORD36A-201ENST00000362874 73 ntBASIC3.03□□□□□ -1.92
CHGAP10645 SNORD93-201ENST00000408813 74 ntBASIC3.03□□□□□ -1.92
CHGAP10645 HMGN2P35-201ENST00000412164 270 ntBASIC3.03□□□□□ -1.92
CHGAP10645 SNORA44.1-201ENST00000517031 108 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms