Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 SNORD63B-201ENST00000411005 70 ntBASIC-0.86□□□□□ -2.55
UBBP0CG47 Z83846.1-201ENST00000446798 265 ntBASIC-0.86□□□□□ -2.55
UBBP0CG47 RNU7-70P-201ENST00000516941 66 ntBASIC-0.86□□□□□ -2.55
UBBP0CG47 MIR4280-201ENST00000582178 76 ntBASIC-0.86□□□□□ -2.55
UBBP0CG47 AC145423.2-201ENST00000610631 239 ntBASIC-0.86□□□□□ -2.55
UBBP0CG47 U4.1-201ENST00000620349 87 ntBASIC-0.86□□□□□ -2.55
UBBP0CG47 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 RNU6-524P-201ENST00000384270 107 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 MIR624-201ENST00000385217 97 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 SNORA49-201ENST00000386157 136 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 MIR1302-11-201ENST00000408051 138 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 MIR1302-9-201ENST00000408365 138 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 MIR1302-10-201ENST00000408734 138 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 AC016907.1-201ENST00000419483 435 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.87□□□□□ -2.55
UBBP0CG47 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.87□□□□□ -2.55
UBBP0CG47 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
UBBP0CG47 MIR1302-2-201ENST00000607096 138 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 AC011603.4-201ENST00000611325 277 ntBASIC-0.87□□□□□ -2.55
UBBP0CG47 RNU6-623P-201ENST00000363143 105 ntBASIC-0.88□□□□□ -2.55
UBBP0CG47 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.88□□□□□ -2.55
UBBP0CG47 RNU6-154P-201ENST00000384306 106 ntBASIC-0.88□□□□□ -2.55
UBBP0CG47 RNU6-900P-201ENST00000384498 102 ntBASIC-0.88□□□□□ -2.55
UBBP0CG47 RNU6-735P-201ENST00000410612 107 ntBASIC-0.88□□□□□ -2.55
UBBP0CG47 MIR4500-201ENST00000579472 76 ntBASIC-0.88□□□□□ -2.55
UBBP0CG47 MIR6851-201ENST00000617060 67 ntBASIC-0.88□□□□□ -2.55
UBBP0CG47 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 MT-TL1-201ENST00000386347 75 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 RNU6-381P-201ENST00000391259 108 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 AC098614.3-201ENST00000438957 440 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 MTND4P19-201ENST00000446659 478 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 RNU6-976P-201ENST00000516086 111 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 AC112487.2-201ENST00000637950 304 ntBASIC-0.89□□□□□ -2.55
UBBP0CG47 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 RNU6-170P-201ENST00000362832 104 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 SNORD116-4-201ENST00000384733 96 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 MIR206-201ENST00000384872 86 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 SNORD2.1-201ENST00000458762 69 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 RNU7-48P-201ENST00000458875 63 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 RNU7-55P-201ENST00000459426 62 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 RNU7-106P-201ENST00000459514 67 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 RNU2-35P-201ENST00000516446 142 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 RNA5SP480-201ENST00000516840 109 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 MIR6759-201ENST00000638110 65 ntBASIC-0.9□□□□□ -2.55
UBBP0CG47 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 SNORA63.7-201ENST00000365579 123 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 MT-TY-201ENST00000387409 66 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 AL445193.1-201ENST00000441183 141 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 AC096720.1-201ENST00000604441 183 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.91□□□□□ -2.56
UBBP0CG47 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 SNORD115-44-201ENST00000365391 82 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 MIR2113-201ENST00000459007 91 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 SNORD19B-201ENST00000459623 84 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 RNA5SP236-201ENST00000516169 116 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.92□□□□□ -2.56
UBBP0CG47 AC007012.1-201ENST00000567192 175 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 MIR4460-201ENST00000577862 86 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.92□□□□□ -2.56
UBBP0CG47 AC090574.1-201ENST00000623186 233 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 AC073869.6-201ENST00000640656 341 ntBASIC-0.92□□□□□ -2.56
UBBP0CG47 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 RNU4-36P-201ENST00000364294 144 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 SNORD38.3-201ENST00000516599 73 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 RNU6-881P-201ENST00000516813 102 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 RNU6-86P-201ENST00000606534 107 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 AL132765.2-201ENST00000610812 351 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 AP001362.1-201ENST00000625165 124 ntBASIC-0.93□□□□□ -2.56
UBBP0CG47 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
UBBP0CG47 RNA5SP257-201ENST00000363023 116 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 SNORA51.5-201ENST00000384126 131 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 RNU6-571P-201ENST00000384128 107 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 AC021146.6-201ENST00000514659 117 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 SNORD116-25-201ENST00000516517 92 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 RNA5SP285-201ENST00000516619 119 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 AP000676.1-201ENST00000533307 52 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 AC037487.3-201ENST00000606668 112 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 MIR1302-1-201ENST00000637932 143 ntBASIC-0.94□□□□□ -2.56
UBBP0CG47 MIR20A-201ENST00000362279 71 ntBASIC-0.95□□□□□ -2.56
UBBP0CG47 RNU6-728P-201ENST00000365375 104 ntBASIC-0.95□□□□□ -2.56
UBBP0CG47 RNU6-472P-201ENST00000384299 107 ntBASIC-0.95□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms