Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
PRKNO60260 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
PRKNO60260 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
PRKNO60260 RNU6-1056P-201ENST00000383996 107 ntBASIC0.93□□□□□ -2.26
PRKNO60260 RNU6-342P-201ENST00000384521 104 ntBASIC0.93□□□□□ -2.26
PRKNO60260 SNORD111-201ENST00000408139 94 ntBASIC0.93□□□□□ -2.26
PRKNO60260 RNA5SP237-201ENST00000410414 113 ntBASIC0.93□□□□□ -2.26
PRKNO60260 RNU6-994P-201ENST00000410507 111 ntBASIC0.93□□□□□ -2.26
PRKNO60260 RPS29P1-201ENST00000465274 159 ntBASIC0.93□□□□□ -2.26
PRKNO60260 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.93□□□□□ -2.26
PRKNO60260 MIR548AE2-201ENST00000583456 67 ntBASIC0.93□□□□□ -2.26
PRKNO60260 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
PRKNO60260 RNU1-93P-201ENST00000364704 169 ntBASIC0.92□□□□□ -2.26
PRKNO60260 RNU6-580P-201ENST00000365159 107 ntBASIC0.92□□□□□ -2.26
PRKNO60260 SNORA18-201ENST00000384416 132 ntBASIC0.92□□□□□ -2.26
PRKNO60260 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
PRKNO60260 RNU6-1165P-201ENST00000410119 107 ntBASIC0.92□□□□□ -2.26
PRKNO60260 SNORD83.1-201ENST00000411362 77 ntBASIC0.92□□□□□ -2.26
PRKNO60260 MIR1270-201ENST00000459320 83 ntBASIC0.92□□□□□ -2.26
PRKNO60260 SNORD124-201ENST00000459577 104 ntBASIC0.92□□□□□ -2.26
PRKNO60260 RNA5SP33-201ENST00000516687 98 ntBASIC0.92□□□□□ -2.26
PRKNO60260 RNA5SP480-201ENST00000516840 109 ntBASIC0.92□□□□□ -2.26
PRKNO60260 MIR3163-201ENST00000581592 73 ntBASIC0.92□□□□□ -2.26
PRKNO60260 MIR6129-201ENST00000616087 109 ntBASIC0.92□□□□□ -2.26
PRKNO60260 AC012676.2-201ENST00000619258 186 ntBASIC0.92□□□□□ -2.26
PRKNO60260 SNORA32-201ENST00000384072 121 ntBASIC0.91□□□□□ -2.26
PRKNO60260 RNU6-880P-201ENST00000384526 107 ntBASIC0.91□□□□□ -2.26
PRKNO60260 RNU6-429P-201ENST00000384582 108 ntBASIC0.91□□□□□ -2.26
PRKNO60260 MIR19B1-201ENST00000384829 87 ntBASIC0.91□□□□□ -2.26
PRKNO60260 MIR548A1-201ENST00000385041 97 ntBASIC0.91□□□□□ -2.26
PRKNO60260 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.91□□□□□ -2.26
PRKNO60260 AC015818.7-201ENST00000428754 109 ntBASIC0.91□□□□□ -2.26
PRKNO60260 AC087499.7-201ENST00000441958 109 ntBASIC0.91□□□□□ -2.26
PRKNO60260 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
PRKNO60260 AC022709.1-201ENST00000615967 87 ntBASIC0.91□□□□□ -2.26
PRKNO60260 MIR6515-201ENST00000619843 57 ntBASIC0.91□□□□□ -2.26
PRKNO60260 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.91□□□□□ -2.26
PRKNO60260 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
PRKNO60260 Y_RNA.299-201ENST00000364973 94 ntBASIC0.9□□□□□ -2.27
PRKNO60260 RNU6-215P-201ENST00000365169 102 ntBASIC0.9□□□□□ -2.27
PRKNO60260 SNORD116-21-201ENST00000384507 92 ntBASIC0.9□□□□□ -2.27
PRKNO60260 Y_RNA.540-201ENST00000384638 111 ntBASIC0.9□□□□□ -2.27
PRKNO60260 MIR548D2-201ENST00000384955 97 ntBASIC0.9□□□□□ -2.27
PRKNO60260 MIR759-201ENST00000390224 91 ntBASIC0.9□□□□□ -2.27
PRKNO60260 RNU4-69P-201ENST00000410677 143 ntBASIC0.9□□□□□ -2.27
PRKNO60260 AC007012.1-201ENST00000567192 175 ntBASIC0.9□□□□□ -2.27
PRKNO60260 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
PRKNO60260 AL662814.1-201ENST00000617364 121 ntBASIC0.9□□□□□ -2.27
PRKNO60260 AL035470.1-201ENST00000622571 220 ntBASIC0.9□□□□□ -2.27
PRKNO60260 Y_RNA.35-201ENST00000362601 101 ntBASIC0.89□□□□□ -2.27
PRKNO60260 RNU6-1325P-201ENST00000364905 105 ntBASIC0.89□□□□□ -2.27
PRKNO60260 RNU6-934P-201ENST00000365154 107 ntBASIC0.89□□□□□ -2.27
PRKNO60260 Y_RNA.362-201ENST00000365518 110 ntBASIC0.89□□□□□ -2.27
PRKNO60260 SNORD20-201ENST00000384550 80 ntBASIC0.89□□□□□ -2.27
PRKNO60260 MIR563-201ENST00000385080 79 ntBASIC0.89□□□□□ -2.27
PRKNO60260 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
PRKNO60260 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
PRKNO60260 RNU6-589P-201ENST00000516485 107 ntBASIC0.89□□□□□ -2.27
PRKNO60260 RNU7-6P-201ENST00000516845 62 ntBASIC0.89□□□□□ -2.27
PRKNO60260 RNU7-35P-201ENST00000517174 62 ntBASIC0.89□□□□□ -2.27
PRKNO60260 MIR4771-2-201ENST00000577758 74 ntBASIC0.89□□□□□ -2.27
PRKNO60260 MIR4771-1-201ENST00000582617 74 ntBASIC0.89□□□□□ -2.27
PRKNO60260 MIR151B-201ENST00000584249 96 ntBASIC0.89□□□□□ -2.27
PRKNO60260 AC087741.2-201ENST00000619415 172 ntBASIC0.89□□□□□ -2.27
PRKNO60260 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
PRKNO60260 MIR30D-201ENST00000362283 70 ntBASIC0.88□□□□□ -2.27
PRKNO60260 SNORD115-19-201ENST00000363098 82 ntBASIC0.88□□□□□ -2.27
PRKNO60260 SNORD115-18-201ENST00000363293 82 ntBASIC0.88□□□□□ -2.27
PRKNO60260 RNY4P6-201ENST00000363667 96 ntBASIC0.88□□□□□ -2.27
PRKNO60260 SNORD115-17-201ENST00000364612 82 ntBASIC0.88□□□□□ -2.27
PRKNO60260 Y_RNA.344-201ENST00000365381 112 ntBASIC0.88□□□□□ -2.27
PRKNO60260 Y_RNA.549-201ENST00000384657 102 ntBASIC0.88□□□□□ -2.27
PRKNO60260 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.88□□□□□ -2.27
PRKNO60260 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.88□□□□□ -2.27
PRKNO60260 RNU6-1086P-201ENST00000410930 100 ntBASIC0.88□□□□□ -2.27
PRKNO60260 RPL39P25-201ENST00000449384 154 ntBASIC0.88□□□□□ -2.27
PRKNO60260 AC067940.1-201ENST00000458411 300 ntBASIC0.88□□□□□ -2.27
PRKNO60260 RNU6-1223P-201ENST00000517124 104 ntBASIC0.88□□□□□ -2.27
PRKNO60260 AC141846.1-201ENST00000568348 142 ntBASIC0.88□□□□□ -2.27
PRKNO60260 MIR4679-2-201ENST00000578358 77 ntBASIC0.88□□□□□ -2.27
PRKNO60260 AC023934.1-201ENST00000574529 2389 ntBASIC0.88□□□□□ -2.27
PRKNO60260 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
PRKNO60260 AL589743.1-201ENST00000551932 2712 ntBASIC0.87□□□□□ -2.27
PRKNO60260 Y_RNA.281-201ENST00000364774 94 ntBASIC0.87□□□□□ -2.27
PRKNO60260 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
PRKNO60260 SNORD77B-201ENST00000391112 67 ntBASIC0.87□□□□□ -2.27
PRKNO60260 MIR18B-201ENST00000454574 71 ntBASIC0.87□□□□□ -2.27
PRKNO60260 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
PRKNO60260 RNU7-79P-201ENST00000516082 62 ntBASIC0.87□□□□□ -2.27
PRKNO60260 Y_RNA.709-201ENST00000516952 92 ntBASIC0.87□□□□□ -2.27
PRKNO60260 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.87□□□□□ -2.27
PRKNO60260 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.87□□□□□ -2.27
PRKNO60260 MIR6788-201ENST00000618842 66 ntBASIC0.87□□□□□ -2.27
PRKNO60260 SNORA22-201ENST00000383907 134 ntBASIC0.86□□□□□ -2.27
PRKNO60260 MIR100-201ENST00000385259 80 ntBASIC0.86□□□□□ -2.27
PRKNO60260 MT-TF-201ENST00000387314 71 ntBASIC0.86□□□□□ -2.27
PRKNO60260 SNORD89-201ENST00000390981 114 ntBASIC0.86□□□□□ -2.27
PRKNO60260 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.86□□□□□ -2.27
PRKNO60260 MIR548J-201ENST00000408833 112 ntBASIC0.86□□□□□ -2.27
PRKNO60260 FABP5P4-201ENST00000437203 171 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 900.1 ms