Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 MIR206-201ENST00000384872 86 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 MIR516A2-201ENST00000384888 90 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 MIR516A1-201ENST00000385033 90 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 MTND1P34-201ENST00000438556 671 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 RNA5SP461-201ENST00000516451 104 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 MIR5688-201ENST00000580619 83 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 MIR548O2-201ENST00000616090 70 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 AC007485.1-201ENST00000616755 206 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 AP001362.1-201ENST00000625165 124 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 snoR1.1-201ENST00000628177 80 ntBASIC-1.75□□□□□ -2.69
TCRBV3S1A0A5B6 MTND5P26-201ENST00000426018 1752 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 RNU6-937P-201ENST00000384325 106 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 RNU6-21P-201ENST00000384710 107 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 RNU7-134P-201ENST00000458997 64 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 MRPS35P2-201ENST00000508242 191 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 C8orf59P2-201ENST00000603441 271 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 MIR6773-201ENST00000612812 74 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 AC084781.2-201ENST00000615568 161 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 U6.100-201ENST00000636230 99 ntBASIC-1.76□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 PMCHL1-202ENST00000423102 261 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 AC026421.1-201ENST00000519101 163 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 AL365205.2-201ENST00000594586 68 ntBASIC-1.77□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 RNY3-201ENST00000365484 102 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 RNU6-337P-201ENST00000391243 106 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 MIR548F5-201ENST00000408421 86 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 AL161932.1-201ENST00000437408 146 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 RNU6-956P-201ENST00000458868 103 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 RNU6-507P-201ENST00000516045 100 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 RNU6-358P-201ENST00000516564 75 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 RNU6-850P-201ENST00000516934 103 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 PISRT1.1-201ENST00000616930 107 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 TRDV1-202ENST00000621643 102 ntBASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.78□□□□□ -2.69
TCRBV3S1A0A5B6 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 RNY1P6-201ENST00000384193 109 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 MIR628-201ENST00000385229 95 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-373P-201ENST00000411247 98 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 MIR1321-201ENST00000637766 79 ntBASIC-1.79□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-845P-201ENST00000362578 103 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 MIRLET7B-201ENST00000385140 83 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 AC096644.2-201ENST00000429278 159 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 MTND1P1-201ENST00000445453 368 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 AC082651.2-201ENST00000496833 166 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 AC087741.2-201ENST00000619415 172 ntBASIC-1.8□□□□□ -2.7
TCRBV3S1A0A5B6 MIR409-201ENST00000362237 79 ntBASIC-1.81□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.81□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.81□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.81□□□□□ -2.7
TCRBV3S1A0A5B6 MIR8485-201ENST00000401372 91 ntBASIC-1.81□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-570P-201ENST00000517051 105 ntBASIC-1.81□□□□□ -2.7
TCRBV3S1A0A5B6 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.81□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-472P-201ENST00000384299 107 ntBASIC-1.82□□□□□ -2.7
TCRBV3S1A0A5B6 MIR29B1-201ENST00000385015 81 ntBASIC-1.82□□□□□ -2.7
TCRBV3S1A0A5B6 SEPT14P8-201ENST00000508026 178 ntBASIC-1.82□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-762P-201ENST00000517107 102 ntBASIC-1.82□□□□□ -2.7
TCRBV3S1A0A5B6 SNORD113-5-201ENST00000607261 78 ntBASIC-1.82□□□□□ -2.7
TCRBV3S1A0A5B6 MIR376B-201ENST00000614515 100 ntBASIC-1.82□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 MT-TT-201ENST00000387460 66 ntBASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-264P-201ENST00000517134 104 ntBASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 AC006006.1-201ENST00000603082 144 ntBASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 AC009779.6-201ENST00000603972 165 ntBASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 RNU2-4P-201ENST00000606190 192 ntBASIC-1.83□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 SNORA62.4-201ENST00000365504 151 ntBASIC-1.84□□□□□ -2.7
TCRBV3S1A0A5B6 RNU6-54P-201ENST00000365563 107 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 303.1 ms