Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SNORA63.7-201ENST00000365579 123 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 MIR635-201ENST00000384830 98 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 MIR1270-201ENST00000459320 83 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 MIR548AE2-201ENST00000583456 67 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 MIR548AZ-201ENST00000616567 95 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.66□□□□□ -2.52
TRAV41A0A0B4J266 RNU1-141P-201ENST00000364623 158 ntBASIC-0.66□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.66□□□□□ -2.52
TRAV41A0A0B4J266 SNORA32.3-201ENST00000384772 121 ntBASIC-0.66□□□□□ -2.52
TRAV41A0A0B4J266 RNU7-10P-201ENST00000607194 63 ntBASIC-0.66□□□□□ -2.52
TRAV41A0A0B4J266 AC093783.1-201ENST00000612976 329 ntBASIC-0.66□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-978P-201ENST00000364371 103 ntBASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-806P-201ENST00000365147 105 ntBASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 RNY1P6-201ENST00000384193 109 ntBASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-823P-201ENST00000391042 103 ntBASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 AC138393.2-201ENST00000414742 246 ntBASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.67□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 SNORA25.7-201ENST00000364375 127 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 RNA5SP451-201ENST00000410588 110 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-651P-201ENST00000411040 105 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 MTND4P19-201ENST00000446659 478 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 RNU7-13P-201ENST00000516413 62 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 MTND5P40-201ENST00000559945 246 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 MIR548AG2-201ENST00000581228 64 ntBASIC-0.68□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 MIR181B2-201ENST00000385004 89 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-381P-201ENST00000391259 108 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 AL603914.1-201ENST00000401964 204 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 MIR1252-201ENST00000408861 65 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 RNU4-43P-201ENST00000410628 137 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 AL022718.1-201ENST00000412004 84 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 ELOCP20-201ENST00000422460 345 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 RNU7-195P-201ENST00000458793 62 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 SERF1AP1-201ENST00000514575 187 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-175P-201ENST00000516896 107 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-570P-201ENST00000517051 105 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 MIR4500-201ENST00000579472 76 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 MIR548AE1-201ENST00000583292 70 ntBASIC-0.69□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-728P-201ENST00000365375 104 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 MIR604-201ENST00000384880 94 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 MIR624-201ENST00000385217 97 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 AC093423.1-201ENST00000440817 142 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 SNORD2.1-201ENST00000458762 69 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 FGF7P4-201ENST00000509595 295 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 AL391099.1-201ENST00000624635 187 ntBASIC-0.7□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 RNY3P1-201ENST00000365085 102 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 MIR539-201ENST00000365690 78 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-35P-201ENST00000384530 107 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-455P-201ENST00000384681 107 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 MIR519E-201ENST00000385075 84 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 MIR519A1-201ENST00000385257 85 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 SNORA79-201ENST00000408376 140 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 MTND5P22-201ENST00000458380 195 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 RNA5SP66-201ENST00000517178 101 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 RNA5SP169-201ENST00000517268 117 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 AC069503.3-201ENST00000618674 145 ntBASIC-0.71□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-770P-201ENST00000363929 105 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 RNU6-524P-201ENST00000384270 107 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 SNORD63B-201ENST00000411005 70 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 RNU7-74P-201ENST00000459104 62 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 RNU2-35P-201ENST00000516446 142 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 SNORA40.15-201ENST00000516884 107 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 YWHAEP2-201ENST00000580066 112 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 MIR4436A-201ENST00000585278 85 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 uc_338.10-201ENST00000621872 182 ntBASIC-0.72□□□□□ -2.52
TRAV41A0A0B4J266 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.73□□□□□ -2.53
TRAV41A0A0B4J266 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.73□□□□□ -2.53
TRAV41A0A0B4J266 RPS29P8-201ENST00000445109 171 ntBASIC-0.73□□□□□ -2.53
TRAV41A0A0B4J266 RNU6-758P-201ENST00000516292 89 ntBASIC-0.73□□□□□ -2.53
TRAV41A0A0B4J266 SNORD116-25-201ENST00000516517 92 ntBASIC-0.73□□□□□ -2.53
TRAV41A0A0B4J266 SNORD114-14-201ENST00000362723 75 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms