Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 RNU7-137P-201ENST00000516788 62 ntBASIC-0.59□□□□□ -2.5
TRBV9A0A0B4J1U6 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.59□□□□□ -2.5
TRBV9A0A0B4J1U6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.59□□□□□ -2.5
TRBV9A0A0B4J1U6 MIR548AZ-201ENST00000616567 95 ntBASIC-0.59□□□□□ -2.5
TRBV9A0A0B4J1U6 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 RNY1P2-201ENST00000364820 117 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 SNORD42.2-201ENST00000365570 69 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 RNU4-17P-201ENST00000365598 141 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 MTND5P22-201ENST00000458380 195 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 SNORD67.1-201ENST00000516618 108 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 NAMPTP3-201ENST00000569273 224 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR4263-201ENST00000584745 83 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 AL162726.3-218ENST00000636401 95 ntBASIC-0.6□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR624-201ENST00000385217 97 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 MT-TD-201ENST00000387419 68 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 AL121914.1-201ENST00000450188 156 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 SNORD2.1-201ENST00000458762 69 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.61□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 SNORD114-10-201ENST00000363409 72 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 RNU6-103P-201ENST00000363686 107 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 RNU6-429P-201ENST00000384582 108 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR635-201ENST00000384830 98 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR599-201ENST00000385069 95 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 AC109327.2-201ENST00000448339 378 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.62□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.63□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR876-201ENST00000401147 81 ntBASIC-0.63□□□□□ -2.51
TRBV9A0A0B4J1U6 HMGN2P22-201ENST00000427588 175 ntBASIC-0.63□□□□□ -2.51
TRBV9A0A0B4J1U6 AC105081.1-201ENST00000617727 106 ntBASIC-0.63□□□□□ -2.51
TRBV9A0A0B4J1U6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.63□□□□□ -2.51
TRBV9A0A0B4J1U6 AL365265.1-201ENST00000621045 234 ntBASIC-0.63□□□□□ -2.51
TRBV9A0A0B4J1U6 SNORD115-2-201ENST00000362842 82 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 RNU6-978P-201ENST00000364371 103 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 SNORD115-20-201ENST00000365099 82 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR516B1-201ENST00000385211 90 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR1912-201ENST00000410389 80 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 BX276092.1-201ENST00000427368 251 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 AC097635.1-201ENST00000450678 155 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 RNA5SP484-201ENST00000458857 111 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 SNORA25.13-201ENST00000516395 103 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 AL442663.2-201ENST00000554385 511 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 AP001180.6-201ENST00000584918 159 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 AC006504.6-201ENST00000590142 199 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 U2.14-201ENST00000615943 113 ntBASIC-0.64□□□□□ -2.51
TRBV9A0A0B4J1U6 RNU6-449P-201ENST00000383914 107 ntBASIC-0.65□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.65□□□□□ -2.51
TRBV9A0A0B4J1U6 AC113195.1-201ENST00000579952 141 ntBASIC-0.65□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR548AE2-201ENST00000583456 67 ntBASIC-0.65□□□□□ -2.51
TRBV9A0A0B4J1U6 MIR4788-201ENST00000639104 80 ntBASIC-0.65□□□□□ -2.51
TRBV9A0A0B4J1U6 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.66□□□□□ -2.52
TRBV9A0A0B4J1U6 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.66□□□□□ -2.52
TRBV9A0A0B4J1U6 RNU6-651P-201ENST00000411040 105 ntBASIC-0.66□□□□□ -2.52
TRBV9A0A0B4J1U6 MTND4LP11-201ENST00000422184 280 ntBASIC-0.66□□□□□ -2.52
TRBV9A0A0B4J1U6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
TRBV9A0A0B4J1U6 AL359881.1-201ENST00000602916 267 ntBASIC-0.66□□□□□ -2.52
TRBV9A0A0B4J1U6 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.67□□□□□ -2.52
TRBV9A0A0B4J1U6 AC022028.1-201ENST00000412054 408 ntBASIC-0.67□□□□□ -2.52
TRBV9A0A0B4J1U6 RPS29P8-201ENST00000445109 171 ntBASIC-0.67□□□□□ -2.52
TRBV9A0A0B4J1U6 RNU7-74P-201ENST00000459104 62 ntBASIC-0.67□□□□□ -2.52
TRBV9A0A0B4J1U6 MIR101-1-201ENST00000362265 75 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 TRAJ51-201ENST00000504127 63 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 MIR5589-201ENST00000579442 60 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 MIR4500-201ENST00000579472 76 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 MIR548S-201ENST00000581352 82 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 MIR4744-201ENST00000581563 82 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 MIR4802-201ENST00000581881 80 ntBASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.68□□□□□ -2.52
TRBV9A0A0B4J1U6 SNORA25.7-201ENST00000364375 127 ntBASIC-0.69□□□□□ -2.52
TRBV9A0A0B4J1U6 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.69□□□□□ -2.52
TRBV9A0A0B4J1U6 RNU7-13P-201ENST00000516413 62 ntBASIC-0.69□□□□□ -2.52
TRBV9A0A0B4J1U6 MIR4493-201ENST00000584016 73 ntBASIC-0.69□□□□□ -2.52
TRBV9A0A0B4J1U6 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.7□□□□□ -2.52
TRBV9A0A0B4J1U6 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.7□□□□□ -2.52
TRBV9A0A0B4J1U6 RNU6-690P-201ENST00000365242 106 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 304.1 ms