Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 MIR206-201ENST00000384872 86 ntBASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 MIR518E-201ENST00000385252 88 ntBASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 AL451046.2-201ENST00000403074 277 ntBASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-592P-201ENST00000411333 103 ntBASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 AP1B1P2-201ENST00000416196 106 ntBASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 CYP3A52P-201ENST00000563326 91 ntBASIC2.11□□□□□ -2.07
PCDHA11Q9Y5I1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 Y_RNA.467-201ENST00000384297 102 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-972P-201ENST00000391208 107 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-887P-201ENST00000410660 100 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 AL161935.2-201ENST00000414627 60 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 AC090844.1-201ENST00000422019 156 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 UBL5P1-201ENST00000507979 193 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-322P-201ENST00000516010 103 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-1006P-201ENST00000516998 103 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 MIR548AO-201ENST00000579992 96 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 MIR1245B-201ENST00000636115 69 ntBASIC2.1□□□□□ -2.07
PCDHA11Q9Y5I1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-573P-201ENST00000383938 106 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 RNU6-1307P-201ENST00000391012 103 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 RNU4-62P-201ENST00000410125 130 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 MIR376B-201ENST00000614515 100 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 MIR4251-201ENST00000635819 61 ntBASIC2.09□□□□□ -2.07
PCDHA11Q9Y5I1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDHA11Q9Y5I1 Y_RNA.247-201ENST00000364500 92 ntBASIC2.08□□□□□ -2.08
PCDHA11Q9Y5I1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCDHA11Q9Y5I1 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
PCDHA11Q9Y5I1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD38.1-201ENST00000363863 68 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-813P-201ENST00000384691 107 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 MIR489-201ENST00000384923 84 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 SNORA67.5-201ENST00000391036 107 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1275P-201ENST00000391087 107 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1086P-201ENST00000410930 100 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 JTBP1-201ENST00000441314 247 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 AC109327.2-201ENST00000448339 378 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 RNU7-41P-201ENST00000515917 61 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 RNU7-79P-201ENST00000516082 62 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD67.1-201ENST00000516618 108 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
PCDHA11Q9Y5I1 Y_RNA.190-201ENST00000363964 101 ntBASIC2.06□□□□□ -2.08
PCDHA11Q9Y5I1 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
PCDHA11Q9Y5I1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.06□□□□□ -2.08
PCDHA11Q9Y5I1 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
PCDHA11Q9Y5I1 AC084768.2-201ENST00000622736 221 ntBASIC2.06□□□□□ -2.08
PCDHA11Q9Y5I1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHA11Q9Y5I1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD114-10-201ENST00000363409 72 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 Y_RNA.219-201ENST00000364232 113 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 Y_RNA.448-201ENST00000384185 108 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-675P-201ENST00000384236 104 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD38B-201ENST00000384690 67 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 MIR34C-201ENST00000384831 77 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 MIR513A1-201ENST00000385138 129 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 U8.15-201ENST00000390947 134 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD111.1-201ENST00000516421 86 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 RNU7-137P-201ENST00000516788 62 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD38B-202ENST00000625943 69 ntBASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHA11Q9Y5I1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD116-10-201ENST00000363791 102 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RNA5SP48-201ENST00000363969 126 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RNY1P1-201ENST00000364372 112 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-865P-201ENST00000364772 107 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RNA5SP259-201ENST00000365541 109 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1321P-201ENST00000390905 107 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RPS29P28-201ENST00000446439 141 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 AC009474.2-201ENST00000451383 136 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 AC079804.2-201ENST00000490376 200 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-250P-201ENST00000516958 103 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 MIR8074-201ENST00000615081 81 ntBASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDHA11Q9Y5I1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1163P-201ENST00000364516 107 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD116-22-201ENST00000384430 92 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 MIR9-3-201ENST00000385084 90 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 SNORD41-201ENST00000386967 70 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-447P-201ENST00000410293 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1118P-201ENST00000410382 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-1076P-201ENST00000410397 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-355P-201ENST00000410427 104 ntBASIC2.03□□□□□ -2.08
PCDHA11Q9Y5I1 RNU6-791P-201ENST00000410467 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 313 ms