Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 MIR4781-201ENST00000585250 76 ntBASIC1.35□□□□□ -2.19
PCDHA13Q9Y5I0 MIR6740-201ENST00000618268 113 ntBASIC1.35□□□□□ -2.19
PCDHA13Q9Y5I0 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
PCDHA13Q9Y5I0 RNY4P6-201ENST00000363667 96 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 Y_RNA.353-201ENST00000365440 108 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 MT-TI-201ENST00000387365 69 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 AC002429.1-201ENST00000437672 148 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 MIR18B-201ENST00000454574 71 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 MIR548AE2-201ENST00000583456 67 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 AL662814.1-201ENST00000617364 121 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 AC012676.2-201ENST00000619258 186 ntBASIC1.34□□□□□ -2.19
PCDHA13Q9Y5I0 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
PCDHA13Q9Y5I0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 AC008163.1-202ENST00000636004 2889 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 RNU6-342P-201ENST00000384521 104 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 SNORA2B-201ENST00000384583 137 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 MIR19B1-201ENST00000384829 87 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 RNA5SP95-201ENST00000410319 137 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 RNA5SP237-201ENST00000410414 113 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 AL359881.1-201ENST00000602916 267 ntBASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PCDHA13Q9Y5I0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 MIR30D-201ENST00000362283 70 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 MT-TF-201ENST00000387314 71 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 RNA5SP247-201ENST00000411181 105 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 AC063976.4-201ENST00000421971 163 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 RNU7-79P-201ENST00000516082 62 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 MIR548AI-201ENST00000579940 88 ntBASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PCDHA13Q9Y5I0 SNORA7.1-201ENST00000363750 139 ntBASIC1.31□□□□□ -2.2
PCDHA13Q9Y5I0 AC141846.1-201ENST00000568348 142 ntBASIC1.31□□□□□ -2.2
PCDHA13Q9Y5I0 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
PCDHA13Q9Y5I0 AL670379.3-201ENST00000605040 251 ntBASIC1.31□□□□□ -2.2
PCDHA13Q9Y5I0 Y_RNA.291-201ENST00000364886 113 ntBASIC1.3□□□□□ -2.2
PCDHA13Q9Y5I0 RNU6-1237P-201ENST00000384777 107 ntBASIC1.3□□□□□ -2.2
PCDHA13Q9Y5I0 SNORD77B-201ENST00000391112 67 ntBASIC1.3□□□□□ -2.2
PCDHA13Q9Y5I0 Y_RNA.649-201ENST00000459077 103 ntBASIC1.3□□□□□ -2.2
PCDHA13Q9Y5I0 RNU7-6P-201ENST00000516845 62 ntBASIC1.3□□□□□ -2.2
PCDHA13Q9Y5I0 MIR4679-2-201ENST00000578358 77 ntBASIC1.3□□□□□ -2.2
PCDHA13Q9Y5I0 AC087741.2-201ENST00000619415 172 ntBASIC1.3□□□□□ -2.2
PCDHA13Q9Y5I0 SNORD115-19-201ENST00000363098 82 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 SNORD115-18-201ENST00000363293 82 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 SNORD115-17-201ENST00000364612 82 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 RNY1P13-201ENST00000365030 105 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 RNU6-949P-201ENST00000384040 107 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 MIR548A3-201ENST00000385297 97 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 MIR1270-201ENST00000459320 83 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 SNORD33.1-201ENST00000516213 88 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 AC019288.1-201ENST00000557918 224 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 AC023827.1-201ENST00000569247 97 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
PCDHA13Q9Y5I0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 SNORA32-201ENST00000384072 121 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 MIR548D2-201ENST00000384955 97 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 RNU6-735P-201ENST00000410612 107 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 SNORA4-201ENST00000584302 138 ntBASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
PCDHA13Q9Y5I0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
PCDHA13Q9Y5I0 Y_RNA.273-201ENST00000364703 102 ntBASIC1.27□□□□□ -2.21
PCDHA13Q9Y5I0 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.27□□□□□ -2.21
PCDHA13Q9Y5I0 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
PCDHA13Q9Y5I0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.27□□□□□ -2.21
PCDHA13Q9Y5I0 uc_338.6-201ENST00000613544 171 ntBASIC1.27□□□□□ -2.21
PCDHA13Q9Y5I0 SNORD114-10-201ENST00000363409 72 ntBASIC1.26□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6-934P-201ENST00000365154 107 ntBASIC1.26□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6-1144P-201ENST00000384247 104 ntBASIC1.26□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.26□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6-1064P-201ENST00000410626 104 ntBASIC1.26□□□□□ -2.21
PCDHA13Q9Y5I0 Y_RNA.629-201ENST00000411368 105 ntBASIC1.26□□□□□ -2.21
PCDHA13Q9Y5I0 FAM71BP1-201ENST00000604431 523 ntBASIC1.26□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6-1056P-201ENST00000383996 107 ntBASIC1.25□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6-476P-201ENST00000384726 107 ntBASIC1.25□□□□□ -2.21
PCDHA13Q9Y5I0 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
PCDHA13Q9Y5I0 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
PCDHA13Q9Y5I0 AC007012.1-201ENST00000567192 175 ntBASIC1.25□□□□□ -2.21
PCDHA13Q9Y5I0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
PCDHA13Q9Y5I0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
PCDHA13Q9Y5I0 AL391516.1-201ENST00000554380 2449 ntBASIC1.24□□□□□ -2.21
PCDHA13Q9Y5I0 RPS26P5-201ENST00000418544 335 ntBASIC1.24□□□□□ -2.21
PCDHA13Q9Y5I0 RPL39P34-201ENST00000477141 156 ntBASIC1.24□□□□□ -2.21
PCDHA13Q9Y5I0 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
PCDHA13Q9Y5I0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.24□□□□□ -2.21
PCDHA13Q9Y5I0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.23□□□□□ -2.21
PCDHA13Q9Y5I0 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
PCDHA13Q9Y5I0 MIR1287-201ENST00000408492 90 ntBASIC1.23□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6-447P-201ENST00000410293 104 ntBASIC1.23□□□□□ -2.21
PCDHA13Q9Y5I0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms