Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNY1P13-201ENST00000365030 105 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-476P-201ENST00000384726 107 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 MIR548D2-201ENST00000384955 97 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-1086P-201ENST00000410930 100 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 AC002429.1-201ENST00000437672 148 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 Y_RNA.773-201ENST00000607168 90 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 AC106800.4-201ENST00000614905 153 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 AC027335.2-201ENST00000624030 375 ntBASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
R3HCC1Q9Y3T6 RNY4P6-201ENST00000363667 96 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 Y_RNA.273-201ENST00000364703 102 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-429P-201ENST00000384582 108 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 AC007012.1-201ENST00000567192 175 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 MIR6129-201ENST00000616087 109 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-834P-201ENST00000362367 110 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 SNORD12-201ENST00000391002 90 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 MIR1323-201ENST00000408090 73 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 Y_RNA.629-201ENST00000411368 105 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 AC019288.1-201ENST00000557918 224 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 RNU6-94P-201ENST00000607728 107 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 AC012676.2-201ENST00000619258 186 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 AL035470.1-201ENST00000622571 220 ntBASIC1.59□□□□□ -2.15
R3HCC1Q9Y3T6 ZNF209P-201ENST00000593450 2304 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 Y_RNA.362-201ENST00000365518 110 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 RNU6-1056P-201ENST00000383996 107 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 RNU6-616P-201ENST00000384353 107 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD111-201ENST00000408139 94 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 AC108667.1-201ENST00000428618 249 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 AL645939.4-201ENST00000604495 135 ntBASIC1.58□□□□□ -2.16
R3HCC1Q9Y3T6 MIR378A-201ENST00000362177 66 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD115-19-201ENST00000363098 82 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD115-18-201ENST00000363293 82 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD115-17-201ENST00000364612 82 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD116-21-201ENST00000384507 92 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 MIR150-201ENST00000385048 84 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD83.1-201ENST00000411362 77 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 AC063976.4-201ENST00000421971 163 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD67.1-201ENST00000516618 108 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 MIR4781-201ENST00000585250 76 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 MIR1255B1-201ENST00000636325 63 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 AL589743.1-201ENST00000551932 2712 ntBASIC1.57□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD77B-201ENST00000391112 67 ntBASIC1.56□□□□□ -2.16
R3HCC1Q9Y3T6 AC015818.7-201ENST00000428754 109 ntBASIC1.56□□□□□ -2.16
R3HCC1Q9Y3T6 AC087499.7-201ENST00000441958 109 ntBASIC1.56□□□□□ -2.16
R3HCC1Q9Y3T6 RNU6-949P-201ENST00000384040 107 ntBASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 RNU7-137P-201ENST00000516788 62 ntBASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 AC068338.1-201ENST00000565567 176 ntBASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 SNORA4-201ENST00000584302 138 ntBASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 FAM71BP1-201ENST00000604431 523 ntBASIC1.55□□□□□ -2.16
R3HCC1Q9Y3T6 MT-TF-201ENST00000387314 71 ntBASIC1.54□□□□□ -2.16
R3HCC1Q9Y3T6 U8.15-201ENST00000390947 134 ntBASIC1.54□□□□□ -2.16
R3HCC1Q9Y3T6 SNORA17.3-201ENST00000391159 129 ntBASIC1.54□□□□□ -2.16
R3HCC1Q9Y3T6 RNU4-62P-201ENST00000410125 130 ntBASIC1.54□□□□□ -2.16
R3HCC1Q9Y3T6 MIR4679-2-201ENST00000578358 77 ntBASIC1.54□□□□□ -2.16
R3HCC1Q9Y3T6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.54□□□□□ -2.16
R3HCC1Q9Y3T6 SNORA63.5-201ENST00000363548 123 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 RNU6-1325P-201ENST00000364905 105 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 RNU6-934P-201ENST00000365154 107 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 RNU6-880P-201ENST00000384526 107 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 AC096949.1-201ENST00000412047 152 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 MIR18B-201ENST00000454574 71 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 RNU7-40P-201ENST00000516397 64 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 AC105081.1-201ENST00000617727 106 ntBASIC1.53□□□□□ -2.16
R3HCC1Q9Y3T6 SNORD20-201ENST00000384550 80 ntBASIC1.52□□□□□ -2.17
R3HCC1Q9Y3T6 MIR19B1-201ENST00000384829 87 ntBASIC1.52□□□□□ -2.17
R3HCC1Q9Y3T6 MIR206-201ENST00000384872 86 ntBASIC1.52□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-1307P-201ENST00000391012 103 ntBASIC1.52□□□□□ -2.17
R3HCC1Q9Y3T6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.52□□□□□ -2.17
R3HCC1Q9Y3T6 AL391516.1-201ENST00000554380 2449 ntBASIC1.52□□□□□ -2.17
R3HCC1Q9Y3T6 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-589P-201ENST00000516485 107 ntBASIC1.51□□□□□ -2.17
R3HCC1Q9Y3T6 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
R3HCC1Q9Y3T6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.51□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-369P-201ENST00000362515 102 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 SNORD114-10-201ENST00000363409 72 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 Y_RNA.281-201ENST00000364774 94 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 BTF3P4-201ENST00000418852 495 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 AL603825.1-201ENST00000438481 80 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 MIR4771-2-201ENST00000577758 74 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 MIR4771-1-201ENST00000582617 74 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 AC020891.4-201ENST00000605745 93 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 AC023934.1-201ENST00000574529 2389 ntBASIC1.5□□□□□ -2.17
R3HCC1Q9Y3T6 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-215P-201ENST00000365169 102 ntBASIC1.49□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-994P-201ENST00000410507 111 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms