Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.3□□□□□ -2.04
RC3H2Q9HBD1 SNORA2B-201ENST00000384583 137 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 RNU6-1086P-201ENST00000410930 100 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 RNU6-602P-201ENST00000411155 105 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 AC087499.7-201ENST00000441958 109 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 SPINT5P-201ENST00000448174 155 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 AC099513.1-201ENST00000490423 301 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 Y_RNA.676-201ENST00000516393 96 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 AC012676.2-201ENST00000619258 186 ntBASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
RC3H2Q9HBD1 SNORD114-10-201ENST00000363409 72 ntBASIC2.28□□□□□ -2.04
RC3H2Q9HBD1 RPL23AP6-201ENST00000446637 472 ntBASIC2.28□□□□□ -2.04
RC3H2Q9HBD1 AC004223.1-201ENST00000479840 271 ntBASIC2.28□□□□□ -2.04
RC3H2Q9HBD1 SNORA31.25-201ENST00000517242 134 ntBASIC2.28□□□□□ -2.04
RC3H2Q9HBD1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.28□□□□□ -2.04
RC3H2Q9HBD1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RC3H2Q9HBD1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RC3H2Q9HBD1 RNA5SP133-201ENST00000363368 119 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 RNU6-478P-201ENST00000363904 110 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 RNA5SP138-201ENST00000365098 114 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 MIR660-201ENST00000385235 97 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 RNU7-48P-201ENST00000458875 63 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 RNU7-153P-201ENST00000516455 62 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 SUB1P4-201ENST00000566062 339 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 AL513423.1-201ENST00000621695 132 ntBASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.27□□□□□ -2.05
RC3H2Q9HBD1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 RNU6-315P-201ENST00000362666 107 ntBASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 SNORD23.1-201ENST00000408212 104 ntBASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 RNA5SP450-201ENST00000411206 102 ntBASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 RNU6-523P-201ENST00000516304 54 ntBASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 AP000942.3-201ENST00000603702 160 ntBASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 Y_RNA.788-201ENST00000622394 112 ntBASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RC3H2Q9HBD1 AL596028.1-201ENST00000326971 197 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-447P-201ENST00000410293 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-1118P-201ENST00000410382 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-1076P-201ENST00000410397 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-355P-201ENST00000410427 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-791P-201ENST00000410467 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-705P-201ENST00000410601 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-1100P-201ENST00000410691 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-860P-201ENST00000410860 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-1217P-201ENST00000411276 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNU6-785P-201ENST00000411324 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 RNA5SP481-201ENST00000516814 122 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 SNORA74.3-201ENST00000517108 154 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 U6.90-201ENST00000614007 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 U6.70-201ENST00000620287 104 ntBASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RC3H2Q9HBD1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 RNU6-112P-201ENST00000363599 104 ntBASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 SNORD115-37-201ENST00000363768 82 ntBASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 RNY1P13-201ENST00000365030 105 ntBASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 MIR4709-201ENST00000577272 72 ntBASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 AP001362.1-201ENST00000625165 124 ntBASIC2.24□□□□□ -2.05
RC3H2Q9HBD1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 HSBP1P2-201ENST00000299671 229 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 RNU1-17P-201ENST00000363022 152 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 Y_RNA.98-201ENST00000363109 102 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 Y_RNA.354-201ENST00000365448 111 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 RNU6-480P-201ENST00000384332 107 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 SNORD38.2-201ENST00000384470 69 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 RNU6-296P-201ENST00000384608 107 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 Y_RNA.545-201ENST00000384652 105 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 RNU6-519P-201ENST00000410590 108 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 SNORA25.13-201ENST00000516395 103 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 MTND5P40-201ENST00000559945 246 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 U7.4-201ENST00000614961 63 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 AC008133.2-201ENST00000624540 351 ntBASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RC3H2Q9HBD1 Y_RNA.57-201ENST00000362806 113 ntBASIC2.22□□□□□ -2.05
RC3H2Q9HBD1 RNU6-1067P-201ENST00000384752 107 ntBASIC2.22□□□□□ -2.05
RC3H2Q9HBD1 RNU6-129P-201ENST00000391022 107 ntBASIC2.22□□□□□ -2.05
RC3H2Q9HBD1 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
RC3H2Q9HBD1 AL450471.1-201ENST00000447509 127 ntBASIC2.22□□□□□ -2.05
RC3H2Q9HBD1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.22□□□□□ -2.05
RC3H2Q9HBD1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RC3H2Q9HBD1 Y_RNA.168-201ENST00000363740 102 ntBASIC2.21□□□□□ -2.06
RC3H2Q9HBD1 AC019129.1-201ENST00000403786 261 ntBASIC2.21□□□□□ -2.06
RC3H2Q9HBD1 SNORD4B-201ENST00000459083 72 ntBASIC2.21□□□□□ -2.06
RC3H2Q9HBD1 snoU13.27-201ENST00000459278 104 ntBASIC2.21□□□□□ -2.06
RC3H2Q9HBD1 RNU6-917P-201ENST00000516294 104 ntBASIC2.21□□□□□ -2.06
RC3H2Q9HBD1 MIR548AO-201ENST00000579992 96 ntBASIC2.21□□□□□ -2.06
RC3H2Q9HBD1 RNU6-624P-201ENST00000363411 107 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 RNU6-1237P-201ENST00000384777 107 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 AC055731.1-201ENST00000474387 401 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 RPS27P21-201ENST00000486977 252 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 AC114801.3-201ENST00000510231 177 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 RNU7-43P-201ENST00000516554 64 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 CYP3A52P-201ENST00000563326 91 ntBASIC2.2□□□□□ -2.06
RC3H2Q9HBD1 MIR4764-201ENST00000580680 88 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms