Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.31□□□□□ -2.2
CDT1Q9H211 Y_RNA.81-201ENST00000362997 102 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 RNA5SP325-201ENST00000363756 130 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 Y_RNA.346-201ENST00000365385 112 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 RNU6-342P-201ENST00000384521 104 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 Y_RNA.531-201ENST00000384589 121 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 RNA5SP136-201ENST00000410906 107 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 AC244023.1-201ENST00000426884 112 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 AC242498.1-201ENST00000604134 111 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 AL035470.1-201ENST00000622571 220 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 MIR4251-201ENST00000635819 61 ntBASIC1.3□□□□□ -2.2
CDT1Q9H211 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
CDT1Q9H211 RNU6-834P-201ENST00000362367 110 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 SNORA22.1-201ENST00000362701 134 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 Y_RNA.198-201ENST00000364013 98 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 SNORA1.1-201ENST00000364671 133 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 Y_RNA.344-201ENST00000365381 112 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 SNORD116-21-201ENST00000384507 92 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 RNU6-1067P-201ENST00000384752 107 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 SNORD12C-201ENST00000386307 89 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 RNU6-602P-201ENST00000411155 105 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 snoU13.16-201ENST00000459350 104 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 AC048334.1-201ENST00000477975 159 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 COX6CP6-201ENST00000490840 228 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 RNU7-53P-201ENST00000516705 60 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 RNU6-919P-201ENST00000516731 104 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
CDT1Q9H211 SNORA22-201ENST00000383907 134 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 MIR598-201ENST00000384868 97 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 RNU6-1054P-201ENST00000411293 104 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 AC063976.4-201ENST00000421971 163 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 Y_RNA.709-201ENST00000516952 92 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 AP003716.2-201ENST00000528260 108 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 AC007012.1-201ENST00000567192 175 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 Y_RNA.773-201ENST00000607168 90 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 AC022709.1-201ENST00000615967 87 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 AC087741.2-201ENST00000619415 172 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 Z97988.1-201ENST00000637697 135 ntBASIC1.28□□□□□ -2.2
CDT1Q9H211 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
CDT1Q9H211 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
CDT1Q9H211 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
CDT1Q9H211 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.27□□□□□ -2.21
CDT1Q9H211 SNORA31.2-201ENST00000516019 134 ntBASIC1.27□□□□□ -2.21
CDT1Q9H211 RNU7-6P-201ENST00000516845 62 ntBASIC1.27□□□□□ -2.21
CDT1Q9H211 MIR548AE2-201ENST00000583456 67 ntBASIC1.27□□□□□ -2.21
CDT1Q9H211 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDT1Q9H211 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDT1Q9H211 Y_RNA.430-201ENST00000384081 110 ntBASIC1.26□□□□□ -2.21
CDT1Q9H211 MIR1185-1-201ENST00000408598 86 ntBASIC1.26□□□□□ -2.21
CDT1Q9H211 AC245047.7-201ENST00000440265 293 ntBASIC1.26□□□□□ -2.21
CDT1Q9H211 RNU7-113P-201ENST00000459273 62 ntBASIC1.26□□□□□ -2.21
CDT1Q9H211 RNU6-1223P-201ENST00000517124 104 ntBASIC1.26□□□□□ -2.21
CDT1Q9H211 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 SNORD115-2-201ENST00000362842 82 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 SNORD115-20-201ENST00000365099 82 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 Y_RNA.362-201ENST00000365518 110 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 SNORA32-201ENST00000384072 121 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 AL022718.1-201ENST00000412004 84 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 RPS3AP1-201ENST00000413190 320 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 AC113410.1-201ENST00000505029 247 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 RNA5SP33-201ENST00000516687 98 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 MIR3152-201ENST00000579801 74 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 MIR1255B1-201ENST00000636325 63 ntBASIC1.25□□□□□ -2.21
CDT1Q9H211 RNA5SP264-201ENST00000363115 107 ntBASIC1.24□□□□□ -2.21
CDT1Q9H211 SNORA63.5-201ENST00000363548 123 ntBASIC1.24□□□□□ -2.21
CDT1Q9H211 Y_RNA.363-201ENST00000365529 113 ntBASIC1.24□□□□□ -2.21
CDT1Q9H211 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.24□□□□□ -2.21
CDT1Q9H211 RNA5SP95-201ENST00000410319 137 ntBASIC1.24□□□□□ -2.21
CDT1Q9H211 PDCD5P2-201ENST00000507570 312 ntBASIC1.24□□□□□ -2.21
CDT1Q9H211 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.24□□□□□ -2.21
CDT1Q9H211 uc_338.6-201ENST00000613544 171 ntBASIC1.24□□□□□ -2.21
CDT1Q9H211 RNU6-654P-201ENST00000364373 107 ntBASIC1.23□□□□□ -2.21
CDT1Q9H211 RNU6-1237P-201ENST00000384777 107 ntBASIC1.23□□□□□ -2.21
CDT1Q9H211 MIR548D2-201ENST00000384955 97 ntBASIC1.23□□□□□ -2.21
CDT1Q9H211 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
CDT1Q9H211 MIR6516-201ENST00000630554 81 ntBASIC1.23□□□□□ -2.21
CDT1Q9H211 Y_RNA.281-201ENST00000364774 94 ntBASIC1.22□□□□□ -2.21
CDT1Q9H211 RNU6-616P-201ENST00000384353 107 ntBASIC1.22□□□□□ -2.21
CDT1Q9H211 RNU6-1307P-201ENST00000391012 103 ntBASIC1.22□□□□□ -2.21
CDT1Q9H211 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.22□□□□□ -2.21
CDT1Q9H211 MIR151B-201ENST00000584249 96 ntBASIC1.22□□□□□ -2.21
CDT1Q9H211 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
CDT1Q9H211 MIR103A2-201ENST00000362154 78 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 MIR96-201ENST00000362288 78 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 Y_RNA.85-201ENST00000363014 111 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 RNY4P6-201ENST00000363667 96 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 Y_RNA.354-201ENST00000365448 111 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 RNU6-106P-201ENST00000384405 107 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 SNORA18-201ENST00000384416 132 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 RNU6-880P-201ENST00000384526 107 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.21□□□□□ -2.22
CDT1Q9H211 RNU4-69P-201ENST00000410677 143 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms