Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 MTATP6P21-201ENST00000440681 189 ntBASIC0.86□□□□□ -2.27
USP44Q9H0E7 RNU7-197P-201ENST00000458836 62 ntBASIC0.86□□□□□ -2.27
USP44Q9H0E7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.86□□□□□ -2.27
USP44Q9H0E7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.86□□□□□ -2.27
USP44Q9H0E7 MIR4771-2-201ENST00000577758 74 ntBASIC0.86□□□□□ -2.27
USP44Q9H0E7 Y_RNA.757-201ENST00000578934 114 ntBASIC0.86□□□□□ -2.27
USP44Q9H0E7 MIR4771-1-201ENST00000582617 74 ntBASIC0.86□□□□□ -2.27
USP44Q9H0E7 MIR30D-201ENST00000362283 70 ntBASIC0.85□□□□□ -2.27
USP44Q9H0E7 Y_RNA.540-201ENST00000384638 111 ntBASIC0.85□□□□□ -2.27
USP44Q9H0E7 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
USP44Q9H0E7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.85□□□□□ -2.27
USP44Q9H0E7 RNA5SP144-201ENST00000410846 116 ntBASIC0.85□□□□□ -2.27
USP44Q9H0E7 Y_RNA.651-201ENST00000459380 103 ntBASIC0.85□□□□□ -2.27
USP44Q9H0E7 AC020891.4-201ENST00000605745 93 ntBASIC0.85□□□□□ -2.27
USP44Q9H0E7 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
USP44Q9H0E7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 RNU6-309P-201ENST00000364573 106 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 SNORD105-201ENST00000386910 85 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 MTND5P41-201ENST00000517498 206 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 MIR3668-201ENST00000582138 75 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 AC011603.4-201ENST00000611325 277 ntBASIC0.84□□□□□ -2.27
USP44Q9H0E7 HSBP1P2-201ENST00000299671 229 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 Y_RNA.171-201ENST00000363760 102 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 Y_RNA.180-201ENST00000363867 113 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 RNU6-690P-201ENST00000365242 106 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 SNORD18B-201ENST00000365659 72 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 MT-TF-201ENST00000387314 71 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 RNU6-240P-201ENST00000516098 97 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 AL662814.1-201ENST00000617364 121 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 AC021753.1-201ENST00000635724 168 ntBASIC0.83□□□□□ -2.28
USP44Q9H0E7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.82□□□□□ -2.28
USP44Q9H0E7 MIR598-201ENST00000384868 97 ntBASIC0.82□□□□□ -2.28
USP44Q9H0E7 RNU6-460P-201ENST00000391158 108 ntBASIC0.82□□□□□ -2.28
USP44Q9H0E7 AL603914.1-201ENST00000401964 204 ntBASIC0.82□□□□□ -2.28
USP44Q9H0E7 Y_RNA.690-201ENST00000516603 95 ntBASIC0.82□□□□□ -2.28
USP44Q9H0E7 MIR4676-201ENST00000583078 72 ntBASIC0.82□□□□□ -2.28
USP44Q9H0E7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.82□□□□□ -2.28
USP44Q9H0E7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.82□□□□□ -2.28
USP44Q9H0E7 RNU4-45P-201ENST00000365469 141 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 RNU6-342P-201ENST00000384521 104 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 RNA5SP237-201ENST00000410414 113 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 RNU7-185P-201ENST00000459215 60 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 PSMC1P5-201ENST00000512850 177 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 RNA5SP436-201ENST00000516020 115 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 RNU6-977P-201ENST00000516411 103 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 RNA5SP480-201ENST00000516840 109 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 MIR4804-201ENST00000581683 73 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 AC023934.1-201ENST00000574529 2389 ntBASIC0.81□□□□□ -2.28
USP44Q9H0E7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
USP44Q9H0E7 Y_RNA.400-201ENST00000383963 111 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 Y_RNA.464-201ENST00000384282 110 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 Y_RNA.470-201ENST00000384307 117 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 SNORA18-201ENST00000384416 132 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 MIR513C-201ENST00000401352 84 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 SNORD99-201ENST00000408612 74 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 AL022718.1-201ENST00000412004 84 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 AL512326.2-201ENST00000426359 151 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.8□□□□□ -2.28
USP44Q9H0E7 SNORA25.12-201ENST00000516202 82 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 RNU2-35P-201ENST00000516446 142 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 AC141846.1-201ENST00000568348 142 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 MIR548X2-201ENST00000579776 100 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 MIR4305-201ENST00000583252 102 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
USP44Q9H0E7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 MIR520F-201ENST00000384824 87 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 MIR7-2-201ENST00000384970 110 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 RNU7-56P-201ENST00000458744 62 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 RNU7-113P-201ENST00000459273 62 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 RNU6-1212P-201ENST00000517023 104 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.79□□□□□ -2.28
USP44Q9H0E7 AC133485.4-201ENST00000561835 220 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 AC138907.4-201ENST00000570107 226 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 PVT1_3.1-201ENST00000620853 95 ntBASIC0.79□□□□□ -2.28
USP44Q9H0E7 SNORD115-2-201ENST00000362842 82 ntBASIC0.78□□□□□ -2.28
USP44Q9H0E7 Y_RNA.215-201ENST00000364204 112 ntBASIC0.78□□□□□ -2.28
USP44Q9H0E7 SNORD115-20-201ENST00000365099 82 ntBASIC0.78□□□□□ -2.28
USP44Q9H0E7 MIR125B2-201ENST00000385128 89 ntBASIC0.78□□□□□ -2.28
USP44Q9H0E7 AC108081.1-201ENST00000604358 221 ntBASIC0.78□□□□□ -2.28
USP44Q9H0E7 AC021443.1-201ENST00000604478 211 ntBASIC0.78□□□□□ -2.28
USP44Q9H0E7 SNORD114-26-201ENST00000363543 72 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 RNA5SP499-201ENST00000363982 119 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 RNU6-915P-201ENST00000364943 103 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
USP44Q9H0E7 MIR569-201ENST00000385228 96 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 U8.15-201ENST00000390947 134 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 RNU1-119P-201ENST00000391122 165 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 MIR938-201ENST00000401216 83 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 MIR1257-201ENST00000408490 117 ntBASIC0.77□□□□□ -2.29
USP44Q9H0E7 RNU6-255P-201ENST00000516957 105 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms