Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 RNU6-153P-201ENST00000364422 104 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 SNORA18-201ENST00000384416 132 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 SNORA2B-201ENST00000384583 137 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 MRPL35P3-201ENST00000421557 364 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 AC063976.4-201ENST00000421971 163 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 RNU7-90P-201ENST00000459216 62 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 MIR548AE2-201ENST00000583456 67 ntBASIC1.63□□□□□ -2.15
TRIM55Q9BYV6 AC008163.1-202ENST00000636004 2889 ntBASIC1.62□□□□□ -2.15
TRIM55Q9BYV6 Y_RNA.213-201ENST00000364178 111 ntBASIC1.62□□□□□ -2.15
TRIM55Q9BYV6 RNU6-580P-201ENST00000365159 107 ntBASIC1.62□□□□□ -2.15
TRIM55Q9BYV6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TRIM55Q9BYV6 RNU7-6P-201ENST00000516845 62 ntBASIC1.62□□□□□ -2.15
TRIM55Q9BYV6 AC036111.3-201ENST00000526389 112 ntBASIC1.62□□□□□ -2.15
TRIM55Q9BYV6 RNU6-1237P-201ENST00000384777 107 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 MIR563-201ENST00000385080 79 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 MIR759-201ENST00000390224 91 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 AC023827.1-201ENST00000569247 97 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 uc_338.28-201ENST00000612082 187 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 AC027335.2-201ENST00000624030 375 ntBASIC1.61□□□□□ -2.15
TRIM55Q9BYV6 SNORD113.3-201ENST00000364630 78 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 Y_RNA.299-201ENST00000364973 94 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 SNORA32-201ENST00000384072 121 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 SNORA67.5-201ENST00000391036 107 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 RNU6-1165P-201ENST00000410119 107 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 RNA5SP237-201ENST00000410414 113 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 AC019288.1-201ENST00000557918 224 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 uc_338.6-201ENST00000613544 171 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 AL662814.1-201ENST00000617364 121 ntBASIC1.6□□□□□ -2.15
TRIM55Q9BYV6 MIR450A1-201ENST00000362262 91 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 Y_RNA.344-201ENST00000365381 112 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 Y_RNA.362-201ENST00000365518 110 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 RNU4-69P-201ENST00000410677 143 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 TRMT112P2-201ENST00000512910 132 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 AC106800.4-201ENST00000614905 153 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 MIR7111-201ENST00000619751 72 ntBASIC1.59□□□□□ -2.15
TRIM55Q9BYV6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TRIM55Q9BYV6 MIR26B-201ENST00000362251 77 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 MIR337-201ENST00000362281 93 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 Y_RNA.116-201ENST00000363292 103 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 SNORD111-201ENST00000408139 94 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 AC002429.1-201ENST00000437672 148 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 RNU7-35P-201ENST00000517174 62 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 MIR3163-201ENST00000581592 73 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 MIR8070-201ENST00000616510 88 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 AC012676.2-201ENST00000619258 186 ntBASIC1.58□□□□□ -2.16
TRIM55Q9BYV6 RNU6-1107P-201ENST00000364817 104 ntBASIC1.57□□□□□ -2.16
TRIM55Q9BYV6 RNU6-955P-201ENST00000410497 104 ntBASIC1.57□□□□□ -2.16
TRIM55Q9BYV6 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
TRIM55Q9BYV6 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
TRIM55Q9BYV6 AC141846.1-201ENST00000568348 142 ntBASIC1.57□□□□□ -2.16
TRIM55Q9BYV6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM55Q9BYV6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.56□□□□□ -2.16
TRIM55Q9BYV6 RNY4P6-201ENST00000363667 96 ntBASIC1.56□□□□□ -2.16
TRIM55Q9BYV6 RNU6-147P-201ENST00000383983 107 ntBASIC1.56□□□□□ -2.16
TRIM55Q9BYV6 MIR548D2-201ENST00000384955 97 ntBASIC1.56□□□□□ -2.16
TRIM55Q9BYV6 RNU6-1086P-201ENST00000410930 100 ntBASIC1.56□□□□□ -2.16
TRIM55Q9BYV6 MIR1270-201ENST00000459320 83 ntBASIC1.56□□□□□ -2.16
TRIM55Q9BYV6 AL589743.1-201ENST00000551932 2712 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 MIR30D-201ENST00000362283 70 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 RNY1P10-201ENST00000363268 113 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 Y_RNA.281-201ENST00000364774 94 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 snoU13.21-201ENST00000459368 105 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 RNU6-412P-201ENST00000516434 106 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 AL645939.4-201ENST00000604495 135 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 Y_RNA.773-201ENST00000607168 90 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 RNU6-94P-201ENST00000607728 107 ntBASIC1.55□□□□□ -2.16
TRIM55Q9BYV6 MT-TF-201ENST00000387314 71 ntBASIC1.54□□□□□ -2.16
TRIM55Q9BYV6 RNU6-554P-201ENST00000410466 106 ntBASIC1.54□□□□□ -2.16
TRIM55Q9BYV6 RPL39P34-201ENST00000477141 156 ntBASIC1.54□□□□□ -2.16
TRIM55Q9BYV6 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
TRIM55Q9BYV6 AL512598.1-201ENST00000610158 273 ntBASIC1.54□□□□□ -2.16
TRIM55Q9BYV6 AC087741.2-201ENST00000619415 172 ntBASIC1.54□□□□□ -2.16
TRIM55Q9BYV6 MIR1255B1-201ENST00000636325 63 ntBASIC1.54□□□□□ -2.16
TRIM55Q9BYV6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 RNU6-755P-201ENST00000364400 103 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 SNORA25.8-201ENST00000364831 128 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 RNU6-106P-201ENST00000384405 107 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 MIR19B1-201ENST00000384829 87 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 SNORD77B-201ENST00000391112 67 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 MIR18B-201ENST00000454574 71 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 RNU7-79P-201ENST00000516082 62 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 SNORA4-201ENST00000584302 138 ntBASIC1.53□□□□□ -2.16
TRIM55Q9BYV6 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 U8.6-201ENST00000364939 135 ntBASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 RNY1P13-201ENST00000365030 105 ntBASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 RPL39P25-201ENST00000449384 154 ntBASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 MIR3613-201ENST00000579844 87 ntBASIC1.52□□□□□ -2.17
TRIM55Q9BYV6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms