Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MIR4788-201ENST00000639104 80 ntBASIC-0.56□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 RNA5SP403-201ENST00000363598 108 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 MIR876-201ENST00000401147 81 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 RNU6-277P-201ENST00000516272 106 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 RNU6-897P-201ENST00000517135 105 ntBASIC-0.57□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 RNU6-509P-201ENST00000363519 107 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 RNU6-290P-201ENST00000365212 101 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 SNORA63.7-201ENST00000365579 123 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 MT-TT-201ENST00000387460 66 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 MIR1302-11-201ENST00000408051 138 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 MIR1302-9-201ENST00000408365 138 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 SNORD75.1-201ENST00000408373 60 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 MIR1302-10-201ENST00000408734 138 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 AC098614.3-201ENST00000438957 440 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 AL356055.1-201ENST00000602528 446 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 MIR1302-2-201ENST00000607096 138 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 RNU7-10P-201ENST00000607194 63 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 RN7SL660P-201ENST00000614852 299 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 MIR1302-1-201ENST00000637932 143 ntBASIC-0.58□□□□□ -2.5
UPK3BQ9BT76 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 RNU6-284P-201ENST00000411105 106 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 RNU7-35P-201ENST00000517174 62 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 AC096720.1-201ENST00000604441 183 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 AC105081.1-201ENST00000617727 106 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 AC090574.1-201ENST00000623186 233 ntBASIC-0.59□□□□□ -2.5
UPK3BQ9BT76 SNORD95.1-201ENST00000364099 68 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 RNA5SP368-201ENST00000364298 116 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 SNORD114-15-201ENST00000364687 72 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 MIR516B1-201ENST00000385211 90 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 AL606845.1-201ENST00000404881 255 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 BX276092.1-201ENST00000427368 251 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 SNORA25.13-201ENST00000516395 103 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 RNA5SP476-201ENST00000516613 103 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 NAMPTP3-201ENST00000569273 224 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.6□□□□□ -2.51
UPK3BQ9BT76 RNU4-84P-201ENST00000364200 139 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 RNU6-211P-201ENST00000384047 107 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 SNORA79-201ENST00000408376 140 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 AL391099.1-201ENST00000624635 187 ntBASIC-0.61□□□□□ -2.51
UPK3BQ9BT76 RNU4-16P-201ENST00000364737 141 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 RNU6-429P-201ENST00000384582 108 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 MIR635-201ENST00000384830 98 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 RNU6-735P-201ENST00000410612 107 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 SNORD19B-201ENST00000459623 84 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 AC074198.2-201ENST00000508153 258 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 AC098479.1-201ENST00000609225 154 ntBASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.62□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 RNU6-811P-201ENST00000384069 107 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 RNA5SP484-201ENST00000458857 111 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 AL365205.2-201ENST00000594586 68 ntBASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.63□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 RNU6-449P-201ENST00000383914 107 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 MIR616-201ENST00000385293 97 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 AC244250.2-201ENST00000418731 148 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 RNU7-113P-201ENST00000459273 62 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 RNA5SP33-201ENST00000516687 98 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 AL132765.2-201ENST00000610812 351 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 MIR6507-201ENST00000613630 70 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 U6atac.1-201ENST00000616025 117 ntBASIC-0.64□□□□□ -2.51
UPK3BQ9BT76 UBE2WP1-201ENST00000362030 340 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 RNU6-865P-201ENST00000364772 107 ntBASIC-0.65□□□□□ -2.51
UPK3BQ9BT76 RNY1P2-201ENST00000364820 117 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms