Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MRPL35P3-201ENST00000421557 364 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 RNU6-162P-201ENST00000516228 103 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 AP003327.1-201ENST00000529684 127 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.52□□□□□ -2.17
ZNF48Q96MX3 MIR4764-201ENST00000580680 88 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.52□□□□□ -2.17
ZNF48Q96MX3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.52□□□□□ -2.17
ZNF48Q96MX3 AC008133.2-201ENST00000624540 351 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 MIR1245B-201ENST00000636115 69 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 Z97988.1-201ENST00000637697 135 ntBASIC1.52□□□□□ -2.17
ZNF48Q96MX3 SNORD115-35-201ENST00000365122 82 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 RNU6-573P-201ENST00000383938 106 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 BTF3P4-201ENST00000418852 495 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 AC108667.1-201ENST00000428618 249 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 snoU13.9-201ENST00000458927 103 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 RPS29P11-201ENST00000496507 171 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 AC108729.3-201ENST00000513484 108 ntBASIC1.51□□□□□ -2.17
ZNF48Q96MX3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
ZNF48Q96MX3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.51□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.467-201ENST00000384297 102 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 MIR206-201ENST00000384872 86 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 RNU6-1275P-201ENST00000391087 107 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 AL451046.2-201ENST00000403074 277 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 RNU6-602P-201ENST00000411155 105 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 AC245047.7-201ENST00000440265 293 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 RNU7-2P-201ENST00000516096 62 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.705-201ENST00000516862 110 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 RNU7-35P-201ENST00000517174 62 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 MIR8081-201ENST00000611533 95 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 AL512310.12-203ENST00000640543 90 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
ZNF48Q96MX3 WWP1P1-201ENST00000466609 2769 ntBASIC1.5□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 RNA5SP190-201ENST00000365222 118 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 UBL5P1-201ENST00000507979 193 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 AC096720.1-201ENST00000604441 183 ntBASIC1.49□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 MIR520C-201ENST00000385005 87 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 MIR653-201ENST00000385279 96 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 RNU6-887P-201ENST00000410660 100 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 AC090844.1-201ENST00000422019 156 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 CYP3A52P-201ENST00000563326 91 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.48□□□□□ -2.17
ZNF48Q96MX3 MIR548AO-201ENST00000579992 96 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 MIR4439-201ENST00000583746 80 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 MIR376B-201ENST00000614515 100 ntBASIC1.48□□□□□ -2.17
ZNF48Q96MX3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.190-201ENST00000363964 101 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 RNU6-972P-201ENST00000391208 107 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 AL161935.2-201ENST00000414627 60 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 AC109327.2-201ENST00000448339 378 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 MIR8063-201ENST00000621930 81 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 MIR4251-201ENST00000635819 61 ntBASIC1.47□□□□□ -2.17
ZNF48Q96MX3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.17
ZNF48Q96MX3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 Y_RNA.219-201ENST00000364232 113 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 RNU6-675P-201ENST00000384236 104 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 RNU6-813P-201ENST00000384691 107 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 MIR34C-201ENST00000384831 77 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 RNU7-41P-201ENST00000515917 61 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 SNORD67.1-201ENST00000516618 108 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.46□□□□□ -2.18
ZNF48Q96MX3 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
ZNF48Q96MX3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 SNORD38.1-201ENST00000363863 68 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 RNY1P1-201ENST00000364372 112 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 JTBP1-201ENST00000441314 247 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 AC022137.1-201ENST00000483735 151 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 RNU7-79P-201ENST00000516082 62 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 RNU7-137P-201ENST00000516788 62 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 MIR4498-201ENST00000577599 66 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 SEPT14P17-201ENST00000617978 177 ntBASIC1.45□□□□□ -2.18
ZNF48Q96MX3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.45□□□□□ -2.18
ZNF48Q96MX3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
ZNF48Q96MX3 Y_RNA.73-201ENST00000362910 113 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 RNU6-1163P-201ENST00000364516 107 ntBASIC1.44□□□□□ -2.18
ZNF48Q96MX3 SNORA16.1-201ENST00000364597 132 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms