Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNU6-342P-201ENST00000384521 104 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 MIR1276-201ENST00000408707 83 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 AL022718.1-201ENST00000412004 84 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 MTATP6P21-201ENST00000440681 189 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 AC011603.4-201ENST00000611325 277 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 MIR8070-201ENST00000616510 88 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.240-201ENST00000364469 95 ntBASIC0.53□□□□□ -2.32
CMTM3Q96MX0 RNY1P13-201ENST00000365030 105 ntBASIC0.53□□□□□ -2.32
CMTM3Q96MX0 Y_RNA.497-201ENST00000384447 98 ntBASIC0.53□□□□□ -2.32
CMTM3Q96MX0 RNU7-113P-201ENST00000459273 62 ntBASIC0.53□□□□□ -2.32
CMTM3Q96MX0 MIR4452-201ENST00000583004 71 ntBASIC0.53□□□□□ -2.32
CMTM3Q96MX0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.53□□□□□ -2.32
CMTM3Q96MX0 RNU6-403P-201ENST00000363163 104 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 RNU1-93P-201ENST00000364704 169 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 RNU6-690P-201ENST00000365242 106 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 RNU6-1318P-201ENST00000365389 103 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 snosnR66.1-201ENST00000391095 99 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.588-201ENST00000391254 102 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 RNU6-588P-201ENST00000410281 105 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 AC096949.1-201ENST00000412047 152 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 AP003327.1-201ENST00000529684 127 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 MIR4491-201ENST00000581087 68 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 MIR6082-201ENST00000613604 109 ntBASIC0.52□□□□□ -2.33
CMTM3Q96MX0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CMTM3Q96MX0 MIR96-201ENST00000362288 78 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.13-201ENST00000362403 112 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 SNORD115-2-201ENST00000362842 82 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 SNORD115-20-201ENST00000365099 82 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 RNU6-679P-201ENST00000391003 106 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 RNU7-120P-201ENST00000459334 63 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 RNU6-138P-201ENST00000515952 107 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 RNU7-79P-201ENST00000516082 62 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.700-201ENST00000516806 100 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 CYP3A137P-201ENST00000562436 69 ntBASIC0.51□□□□□ -2.33
CMTM3Q96MX0 SNORD114-22-201ENST00000365423 72 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.470-201ENST00000384307 117 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 MIR499A-201ENST00000384903 122 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 RNU6-765P-201ENST00000516916 99 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 RNU7-35P-201ENST00000517174 62 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 DNAJC19P2-201ENST00000593340 302 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 AL078603.1-201ENST00000603824 313 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 AC092634.7-201ENST00000621022 103 ntBASIC0.5□□□□□ -2.33
CMTM3Q96MX0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CMTM3Q96MX0 MIR373-201ENST00000362273 69 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.29-201ENST00000362570 113 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.120-201ENST00000363304 110 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.441-201ENST00000384123 112 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 SNORD37.2-201ENST00000391075 66 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 RPS29P1-201ENST00000465274 159 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.676-201ENST00000516393 96 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 RNA5SP33-201ENST00000516687 98 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 RNU6-861P-201ENST00000516745 106 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.49□□□□□ -2.33
CMTM3Q96MX0 MIR3678-201ENST00000578455 94 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 MIR4305-201ENST00000583252 102 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 MIR6767-201ENST00000637302 66 ntBASIC0.49□□□□□ -2.33
CMTM3Q96MX0 AL589743.1-201ENST00000551932 2712 ntBASIC0.48□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.48□□□□□ -2.33
CMTM3Q96MX0 SNORD18B-201ENST00000365659 72 ntBASIC0.48□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.617-201ENST00000410920 90 ntBASIC0.48□□□□□ -2.33
CMTM3Q96MX0 AL512326.2-201ENST00000426359 151 ntBASIC0.48□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.662-201ENST00000516028 97 ntBASIC0.48□□□□□ -2.33
CMTM3Q96MX0 RNU2-60P-201ENST00000517290 128 ntBASIC0.48□□□□□ -2.33
CMTM3Q96MX0 RNU6-682P-201ENST00000363843 106 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.531-201ENST00000384589 121 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 Y_RNA.584-201ENST00000391090 114 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 RNU6-1135P-201ENST00000411083 103 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 RNA5SP94-201ENST00000516917 108 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 AC004812.1-201ENST00000540773 146 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 AC133485.4-201ENST00000561835 220 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 AC138907.4-201ENST00000570107 226 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 MIR151B-201ENST00000584249 96 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 MIR3658-201ENST00000636291 56 ntBASIC0.47□□□□□ -2.33
CMTM3Q96MX0 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
CMTM3Q96MX0 Y_RNA.257-201ENST00000364596 102 ntBASIC0.46□□□□□ -2.34
CMTM3Q96MX0 Y_RNA.785-201ENST00000384290 109 ntBASIC0.46□□□□□ -2.34
CMTM3Q96MX0 SNORA72.6-201ENST00000384520 129 ntBASIC0.46□□□□□ -2.34
CMTM3Q96MX0 RNU6-240P-201ENST00000516098 97 ntBASIC0.46□□□□□ -2.34
CMTM3Q96MX0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.46□□□□□ -2.34
CMTM3Q96MX0 MIR6788-201ENST00000618842 66 ntBASIC0.46□□□□□ -2.34
CMTM3Q96MX0 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
CMTM3Q96MX0 RNA5SP517-201ENST00000364724 117 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
CMTM3Q96MX0 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 SNORA25.12-201ENST00000516202 82 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 RNU6-469P-201ENST00000516253 101 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 RNA5SP220-201ENST00000516298 104 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 RNU2-35P-201ENST00000516446 142 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 SNORA81.3-201ENST00000517283 198 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 AC021443.1-201ENST00000604478 211 ntBASIC0.45□□□□□ -2.34
CMTM3Q96MX0 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
CMTM3Q96MX0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.44□□□□□ -2.34
CMTM3Q96MX0 SNORA40.8-201ENST00000411034 126 ntBASIC0.44□□□□□ -2.34
CMTM3Q96MX0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
CMTM3Q96MX0 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms