Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MIR1-1-201ENST00000362147 71 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 Y_RNA.8-201ENST00000362353 102 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-508P-201ENST00000363231 103 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-309P-201ENST00000364573 106 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-209P-201ENST00000384118 107 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 Y_RNA.506-201ENST00000384494 102 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 SNORD89-201ENST00000390981 114 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-460P-201ENST00000391158 108 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 AL022718.1-201ENST00000412004 84 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-240P-201ENST00000516098 97 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 MIR3121-201ENST00000579680 77 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 MIR6866-201ENST00000638146 69 ntBASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SYNE3Q6ZMZ3 Y_RNA.171-201ENST00000363760 102 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-915P-201ENST00000364943 103 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 MIR520E-201ENST00000384867 87 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 RNU2-35P-201ENST00000516446 142 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 AC133485.4-201ENST00000561835 220 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 AC141846.1-201ENST00000568348 142 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 AC138907.4-201ENST00000570107 226 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 MIR4653-201ENST00000585107 83 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 RMST_2.1-201ENST00000617263 136 ntBASIC0.93□□□□□ -2.26
SYNE3Q6ZMZ3 MIR146A-201ENST00000385201 99 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 SNORA25.12-201ENST00000516202 82 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 RNU7-35P-201ENST00000517174 62 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 MIR4771-2-201ENST00000577758 74 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 MIR4804-201ENST00000581683 73 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 MIR4771-1-201ENST00000582617 74 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 MIR4676-201ENST00000583078 72 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 AC020891.4-201ENST00000605745 93 ntBASIC0.92□□□□□ -2.26
SYNE3Q6ZMZ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 RNU6-949P-201ENST00000384040 107 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 Y_RNA.420-201ENST00000384043 110 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 SNORD105-201ENST00000386910 85 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 MT-TR-201ENST00000387439 65 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 AC096949.1-201ENST00000412047 152 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 RNU7-185P-201ENST00000459215 60 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.91□□□□□ -2.26
SYNE3Q6ZMZ3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.470-201ENST00000384307 117 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.488-201ENST00000384403 102 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 SNORA18-201ENST00000384416 132 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6-342P-201ENST00000384521 104 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 RNU7-113P-201ENST00000459273 62 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.692-201ENST00000516627 105 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 AP001328.1-201ENST00000528550 176 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 AC004812.1-201ENST00000540773 146 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 AC108081.1-201ENST00000604358 221 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 AC021443.1-201ENST00000604478 211 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 U7.2-201ENST00000607576 63 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
SYNE3Q6ZMZ3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.366-201ENST00000365540 102 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 MIR125B2-201ENST00000385128 89 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 MIR100-201ENST00000385259 80 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 RNA5SP237-201ENST00000410414 113 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 AL512326.2-201ENST00000426359 151 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 RNU7-56P-201ENST00000458744 62 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 RNU7-123P-201ENST00000515911 60 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 SNORD92-201ENST00000585078 85 ntBASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.89□□□□□ -2.27
SYNE3Q6ZMZ3 AC023934.1-201ENST00000574529 2389 ntBASIC0.88□□□□□ -2.27
SYNE3Q6ZMZ3 RNY1P13-201ENST00000365030 105 ntBASIC0.88□□□□□ -2.27
SYNE3Q6ZMZ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SYNE3Q6ZMZ3 MIR489-201ENST00000384923 84 ntBASIC0.88□□□□□ -2.27
SYNE3Q6ZMZ3 MIR1257-201ENST00000408490 117 ntBASIC0.88□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.88□□□□□ -2.27
SYNE3Q6ZMZ3 RNU7-164P-201ENST00000459221 62 ntBASIC0.88□□□□□ -2.27
SYNE3Q6ZMZ3 MIR938-201ENST00000401216 83 ntBASIC0.87□□□□□ -2.27
SYNE3Q6ZMZ3 MIR548J-201ENST00000408833 112 ntBASIC0.87□□□□□ -2.27
SYNE3Q6ZMZ3 AC015818.7-201ENST00000428754 109 ntBASIC0.87□□□□□ -2.27
SYNE3Q6ZMZ3 AC087499.7-201ENST00000441958 109 ntBASIC0.87□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6-977P-201ENST00000516411 103 ntBASIC0.87□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6-426P-201ENST00000516464 97 ntBASIC0.87□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.568-201ENST00000384742 113 ntBASIC0.86□□□□□ -2.27
SYNE3Q6ZMZ3 AC244098.3-201ENST00000424803 96 ntBASIC0.86□□□□□ -2.27
SYNE3Q6ZMZ3 AL137067.1-201ENST00000615933 120 ntBASIC0.86□□□□□ -2.27
SYNE3Q6ZMZ3 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.85□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6-647P-201ENST00000364243 107 ntBASIC0.85□□□□□ -2.27
SYNE3Q6ZMZ3 Y_RNA.299-201ENST00000364973 94 ntBASIC0.85□□□□□ -2.27
SYNE3Q6ZMZ3 RNU6-1062P-201ENST00000383908 107 ntBASIC0.85□□□□□ -2.27
SYNE3Q6ZMZ3 MIR520F-201ENST00000384824 87 ntBASIC0.85□□□□□ -2.27
SYNE3Q6ZMZ3 MIR573-201ENST00000384964 99 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 205.2 ms