Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SNORA6-201ENST00000384033 151 ntBASIC2.59□□□□□ -1.99
RNF20Q5VTR2 SNORA2B-201ENST00000384583 137 ntBASIC2.59□□□□□ -1.99
RNF20Q5VTR2 AC090255.1-201ENST00000495779 349 ntBASIC2.59□□□□□ -1.99
RNF20Q5VTR2 MIR3192-201ENST00000584920 77 ntBASIC2.59□□□□□ -1.99
RNF20Q5VTR2 SNORD41-201ENST00000386967 70 ntBASIC2.58□□□□□ -2
RNF20Q5VTR2 MIR6840-201ENST00000611937 71 ntBASIC2.58□□□□□ -2
RNF20Q5VTR2 AC131280.1-202ENST00000624067 4211 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 AL596028.1-201ENST00000326971 197 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 SNORA25.3-201ENST00000363205 127 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 RNU6-480P-201ENST00000384332 107 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 Y_RNA.607-201ENST00000410597 98 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 AL161935.2-201ENST00000414627 60 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 AC079804.2-201ENST00000490376 200 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 RPS29P11-201ENST00000496507 171 ntBASIC2.57□□□□□ -2
RNF20Q5VTR2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.57□□□□□ -2
RNF20Q5VTR2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RNF20Q5VTR2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.56□□□□□ -2
RNF20Q5VTR2 RNU4-82P-201ENST00000362443 140 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 RNA5SP48-201ENST00000363969 126 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 RNU6-949P-201ENST00000384040 107 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 RNU6-524P-201ENST00000384270 107 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 RNU6-24P-201ENST00000384440 107 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 MIR588-201ENST00000384900 83 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 RNA5SP212-201ENST00000391223 107 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 AL356320.1-201ENST00000429616 163 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 AL161932.1-201ENST00000437408 146 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 JTBP1-201ENST00000441314 247 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 snoU13.2-201ENST00000459201 104 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 AC090897.1-201ENST00000580909 226 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 AL096861.1-201ENST00000610899 123 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 MIR6873-201ENST00000622788 63 ntBASIC2.56□□□□□ -2
RNF20Q5VTR2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
RNF20Q5VTR2 RPS27P21-201ENST00000486977 252 ntBASIC2.55□□□□□ -2
RNF20Q5VTR2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.55□□□□□ -2
RNF20Q5VTR2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.55□□□□□ -2
RNF20Q5VTR2 MIR4500-201ENST00000579472 76 ntBASIC2.55□□□□□ -2
RNF20Q5VTR2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.55□□□□□ -2
RNF20Q5VTR2 Y_RNA.168-201ENST00000363740 102 ntBASIC2.54□□□□□ -2
RNF20Q5VTR2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.54□□□□□ -2
RNF20Q5VTR2 RNU6-947P-201ENST00000516264 106 ntBASIC2.54□□□□□ -2
RNF20Q5VTR2 AP000942.3-201ENST00000603702 160 ntBASIC2.54□□□□□ -2
RNF20Q5VTR2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.54□□□□□ -2
RNF20Q5VTR2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
RNF20Q5VTR2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.53□□□□□ -2
RNF20Q5VTR2 RNY1P2-201ENST00000364820 117 ntBASIC2.53□□□□□ -2
RNF20Q5VTR2 Y_RNA.316-201ENST00000365118 111 ntBASIC2.53□□□□□ -2
RNF20Q5VTR2 RNU4-52P-201ENST00000384209 138 ntBASIC2.53□□□□□ -2
RNF20Q5VTR2 MIR519C-201ENST00000385053 87 ntBASIC2.53□□□□□ -2
RNF20Q5VTR2 MIR5002-201ENST00000584713 97 ntBASIC2.53□□□□□ -2
RNF20Q5VTR2 AP000553.5-201ENST00000641933 54 ntBASIC2.53□□□□□ -2
RNF20Q5VTR2 WWP1P1-201ENST00000466609 2769 ntBASIC2.53□□□□□ -2
RNF20Q5VTR2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RNF20Q5VTR2 HSBP1P2-201ENST00000299671 229 ntBASIC2.52□□□□□ -2.01
RNF20Q5VTR2 SNORA16B-201ENST00000364674 135 ntBASIC2.52□□□□□ -2.01
RNF20Q5VTR2 MIR1302-7-201ENST00000408841 72 ntBASIC2.52□□□□□ -2.01
RNF20Q5VTR2 RNU6-519P-201ENST00000410590 108 ntBASIC2.52□□□□□ -2.01
RNF20Q5VTR2 AC138749.4-201ENST00000563970 127 ntBASIC2.52□□□□□ -2.01
RNF20Q5VTR2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.52□□□□□ -2.01
RNF20Q5VTR2 U6.109-201ENST00000636749 87 ntBASIC2.52□□□□□ -2.01
RNF20Q5VTR2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF20Q5VTR2 RNU6-396P-201ENST00000365369 105 ntBASIC2.51□□□□□ -2.01
RNF20Q5VTR2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RNF20Q5VTR2 RNU6-205P-201ENST00000390858 107 ntBASIC2.51□□□□□ -2.01
RNF20Q5VTR2 RNU4-83P-201ENST00000410863 133 ntBASIC2.51□□□□□ -2.01
RNF20Q5VTR2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF20Q5VTR2 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
RNF20Q5VTR2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.51□□□□□ -2.01
RNF20Q5VTR2 AP000753.3-201ENST00000604083 169 ntBASIC2.51□□□□□ -2.01
RNF20Q5VTR2 MIR6740-201ENST00000618268 113 ntBASIC2.51□□□□□ -2.01
RNF20Q5VTR2 AC025033.1-201ENST00000463883 194 ntBASIC2.5□□□□□ -2.01
RNF20Q5VTR2 AC093729.1-201ENST00000513074 128 ntBASIC2.5□□□□□ -2.01
RNF20Q5VTR2 RNU1-40P-201ENST00000516816 164 ntBASIC2.5□□□□□ -2.01
RNF20Q5VTR2 RNU1-97P-201ENST00000516872 164 ntBASIC2.5□□□□□ -2.01
RNF20Q5VTR2 AL773524.1-201ENST00000614065 229 ntBASIC2.5□□□□□ -2.01
RNF20Q5VTR2 MIR8066-201ENST00000617280 78 ntBASIC2.5□□□□□ -2.01
RNF20Q5VTR2 RPL23AP94-201ENST00000512518 302 ntBASIC2.49□□□□□ -2.01
RNF20Q5VTR2 MIR1273D-201ENST00000577266 86 ntBASIC2.49□□□□□ -2.01
RNF20Q5VTR2 MIR4287-201ENST00000579398 78 ntBASIC2.49□□□□□ -2.01
RNF20Q5VTR2 AL357312.1-201ENST00000603879 298 ntBASIC2.49□□□□□ -2.01
RNF20Q5VTR2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF20Q5VTR2 Y_RNA.57-201ENST00000362806 113 ntBASIC2.48□□□□□ -2.01
RNF20Q5VTR2 HMGN2P38-201ENST00000423806 265 ntBASIC2.48□□□□□ -2.01
RNF20Q5VTR2 BX276092.1-201ENST00000427368 251 ntBASIC2.48□□□□□ -2.01
RNF20Q5VTR2 RNU6-717P-201ENST00000459076 104 ntBASIC2.48□□□□□ -2.01
RNF20Q5VTR2 RNU7-153P-201ENST00000516455 62 ntBASIC2.48□□□□□ -2.01
RNF20Q5VTR2 SNORA4-201ENST00000584302 138 ntBASIC2.48□□□□□ -2.01
RNF20Q5VTR2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF20Q5VTR2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RNF20Q5VTR2 Y_RNA.94-201ENST00000363068 106 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 Y_RNA.119-201ENST00000363301 96 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 RNA5SP133-201ENST00000363368 119 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 RNU4-32P-201ENST00000363404 141 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 SNORD115-37-201ENST00000363768 82 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 RNU6-1296P-201ENST00000383879 107 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 MIR563-201ENST00000385080 79 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 RNA5SP425-201ENST00000410336 112 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 AC087499.7-201ENST00000441958 109 ntBASIC2.47□□□□□ -2.01
RNF20Q5VTR2 HSPE1P24-201ENST00000450782 238 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 311.3 ms