Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNA5SP257-201ENST00000363023 116 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 SNORD118-201ENST00000363593 134 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 RNU6-923P-201ENST00000364753 107 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 RNU6-1336P-201ENST00000383886 109 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.459-201ENST00000384251 102 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 SNORA18-201ENST00000384416 132 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 RNU6-738P-201ENST00000384531 106 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 SNORA20-201ENST00000384662 132 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.14□□□□□ -2.39
TNFRSF9Q07011 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 RNU6-1149P-201ENST00000516810 97 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 RNU7-70P-201ENST00000516941 66 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 AP003327.1-201ENST00000529684 127 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.812-201ENST00000610788 101 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 MIR6082-201ENST00000613604 109 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.784-201ENST00000613803 101 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.787-201ENST00000616522 101 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.780-201ENST00000617336 101 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.801-201ENST00000619005 101 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 SNORD27-201ENST00000363981 72 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 RNU4-16P-201ENST00000364737 141 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 RNY1P13-201ENST00000365030 105 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 RNU6-949P-201ENST00000384040 107 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.539-201ENST00000384635 107 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 MIR568-201ENST00000385036 95 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 SNORD71-201ENST00000411292 86 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 MTND2P23-201ENST00000422990 651 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 MTND1P19-201ENST00000511780 315 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.797-201ENST00000515977 94 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 MRPS18CP4-201ENST00000535821 231 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 MIR4308-201ENST00000580634 81 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 uc_338.16-201ENST00000621804 95 ntBASIC0.13□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.32-201ENST00000362589 110 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 SNORA63-201ENST00000363450 132 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 RNA5SP62-201ENST00000363457 110 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.171-201ENST00000363760 102 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.251-201ENST00000364551 99 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.288-201ENST00000364854 92 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.477-201ENST00000384352 108 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.562-201ENST00000384695 113 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 MIR624-201ENST00000385217 97 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.626-201ENST00000411288 95 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 SNORA31.14-201ENST00000516728 116 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 SNORA25.16-201ENST00000516741 121 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 MTND5P34-201ENST00000568888 325 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.757-201ENST00000578934 114 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 MTND5P32-201ENST00000560711 1802 ntBASIC0.12□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.149-201ENST00000363558 117 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.182-201ENST00000363880 111 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 SNORA72.6-201ENST00000384520 129 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.571-201ENST00000384753 98 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 MIR548H3-201ENST00000408771 118 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 AL512326.2-201ENST00000426359 151 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 RNU7-79P-201ENST00000516082 62 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 RNU6-765P-201ENST00000516916 99 ntBASIC0.11□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.121-201ENST00000363309 113 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 RNU6-643P-201ENST00000384018 107 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.536-201ENST00000384621 113 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 RNU6-291P-201ENST00000384720 107 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 SNORD58.1-201ENST00000391313 66 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 RNU5E-9P-201ENST00000411164 104 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 SUMO1P3-201ENST00000439961 304 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 AC069271.1-201ENST00000445577 156 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 RNU6-469P-201ENST00000516253 101 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.680-201ENST00000516441 93 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 RNA5SP268-201ENST00000516828 124 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TNFRSF9Q07011 AL360085.1-201ENST00000604713 532 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 U6.106-201ENST00000636360 105 ntBASIC0.1□□□□□ -2.39
TNFRSF9Q07011 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.1□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.20-201ENST00000362479 113 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.133-201ENST00000363428 110 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 RNA5SP245-201ENST00000364239 121 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 SNORA25.7-201ENST00000364375 127 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.412-201ENST00000384001 104 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.470-201ENST00000384307 117 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 RNU4-70P-201ENST00000384579 139 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 RNU6-535P-201ENST00000384722 107 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 RNU2-59P-201ENST00000410482 191 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 RNA5SP144-201ENST00000410846 116 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 RNU6-1086P-201ENST00000410930 100 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 AC073261.1-201ENST00000429409 121 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 MTCYBP9-201ENST00000431021 303 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.697-201ENST00000516776 113 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 MIR3128-201ENST00000581957 66 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 MIR6755-201ENST00000619993 66 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.174-201ENST00000363781 105 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNU6-694P-201ENST00000364071 147 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNU6-1082P-201ENST00000364574 107 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNU6-275P-201ENST00000364910 107 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 252.8 ms