Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC010487.4-201ENST00000637027 61 ntBASIC0.64□□□□□ -2.31
DDX58O95786 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
DDX58O95786 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
DDX58O95786 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
DDX58O95786 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
DDX58O95786 AC107027.2-201ENST00000512197 115 ntBASIC0.62□□□□□ -2.31
DDX58O95786 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.62□□□□□ -2.31
DDX58O95786 AC008608.1-201ENST00000603910 127 ntBASIC0.62□□□□□ -2.31
DDX58O95786 AC009779.6-201ENST00000603972 165 ntBASIC0.62□□□□□ -2.31
DDX58O95786 AL662814.1-201ENST00000617364 121 ntBASIC0.62□□□□□ -2.31
DDX58O95786 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
DDX58O95786 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
DDX58O95786 Y_RNA.188-201ENST00000363952 111 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU4-45P-201ENST00000365469 141 ntBASIC0.61□□□□□ -2.31
DDX58O95786 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU6-679P-201ENST00000391003 106 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU4-83P-201ENST00000410863 133 ntBASIC0.61□□□□□ -2.31
DDX58O95786 AC114737.2-201ENST00000421583 173 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU6-1271P-201ENST00000517049 105 ntBASIC0.61□□□□□ -2.31
DDX58O95786 AC130289.1-201ENST00000577321 73 ntBASIC0.61□□□□□ -2.31
DDX58O95786 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
DDX58O95786 RNU6-403P-201ENST00000363163 104 ntBASIC0.6□□□□□ -2.31
DDX58O95786 RNU6-312P-201ENST00000364629 107 ntBASIC0.6□□□□□ -2.31
DDX58O95786 Y_RNA.337-201ENST00000365312 102 ntBASIC0.6□□□□□ -2.31
DDX58O95786 Y_RNA.435-201ENST00000384095 112 ntBASIC0.6□□□□□ -2.31
DDX58O95786 RNU6-768P-201ENST00000384683 107 ntBASIC0.6□□□□□ -2.31
DDX58O95786 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.6□□□□□ -2.31
DDX58O95786 AC022559.1-201ENST00000520905 205 ntBASIC0.6□□□□□ -2.31
DDX58O95786 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
DDX58O95786 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
DDX58O95786 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.6□□□□□ -2.31
DDX58O95786 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
DDX58O95786 Y_RNA.233-201ENST00000364407 101 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNA5SP117-201ENST00000365294 118 ntBASIC0.59□□□□□ -2.31
DDX58O95786 Y_RNA.357-201ENST00000365487 109 ntBASIC0.59□□□□□ -2.31
DDX58O95786 Y_RNA.401-201ENST00000383965 117 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNY1P6-201ENST00000384193 109 ntBASIC0.59□□□□□ -2.31
DDX58O95786 SNORA18-201ENST00000384416 132 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNU6-1219P-201ENST00000516143 112 ntBASIC0.59□□□□□ -2.31
DDX58O95786 AC090897.1-201ENST00000580909 226 ntBASIC0.59□□□□□ -2.31
DDX58O95786 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.59□□□□□ -2.31
DDX58O95786 RNU6-818P-201ENST00000364837 108 ntBASIC0.58□□□□□ -2.32
DDX58O95786 Y_RNA.297-201ENST00000364950 91 ntBASIC0.58□□□□□ -2.32
DDX58O95786 Y_RNA.793-201ENST00000411222 111 ntBASIC0.58□□□□□ -2.32
DDX58O95786 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.58□□□□□ -2.32
DDX58O95786 AC141846.1-201ENST00000568348 142 ntBASIC0.58□□□□□ -2.32
DDX58O95786 MIR6844-201ENST00000637122 62 ntBASIC0.58□□□□□ -2.32
DDX58O95786 MIR6841-201ENST00000637129 72 ntBASIC0.58□□□□□ -2.32
DDX58O95786 Y_RNA.52-201ENST00000362760 96 ntBASIC0.57□□□□□ -2.32
DDX58O95786 RNU6-1082P-201ENST00000364574 107 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.274-201ENST00000364714 101 ntBASIC0.57□□□□□ -2.32
DDX58O95786 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.644-201ENST00000459006 113 ntBASIC0.57□□□□□ -2.32
DDX58O95786 AC002350.1-201ENST00000490759 375 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.674-201ENST00000516362 113 ntBASIC0.57□□□□□ -2.32
DDX58O95786 RNU6-448P-201ENST00000517052 107 ntBASIC0.57□□□□□ -2.32
DDX58O95786 MIR924-201ENST00000638017 53 ntBASIC0.57□□□□□ -2.32
DDX58O95786 Y_RNA.30-201ENST00000362572 97 ntBASIC0.56□□□□□ -2.32
DDX58O95786 SNORA72.6-201ENST00000384520 129 ntBASIC0.56□□□□□ -2.32
DDX58O95786 U8.15-201ENST00000390947 134 ntBASIC0.56□□□□□ -2.32
DDX58O95786 RNU5E-9P-201ENST00000411164 104 ntBASIC0.56□□□□□ -2.32
DDX58O95786 Y_RNA.115-201ENST00000363272 98 ntBASIC0.55□□□□□ -2.32
DDX58O95786 Y_RNA.171-201ENST00000363760 102 ntBASIC0.55□□□□□ -2.32
DDX58O95786 Y_RNA.374-201ENST00000365606 101 ntBASIC0.55□□□□□ -2.32
DDX58O95786 SNORD37.2-201ENST00000391075 66 ntBASIC0.55□□□□□ -2.32
DDX58O95786 SNORD100-201ENST00000408573 76 ntBASIC0.55□□□□□ -2.32
DDX58O95786 AL022718.1-201ENST00000412004 84 ntBASIC0.55□□□□□ -2.32
DDX58O95786 RNU7-113P-201ENST00000459273 62 ntBASIC0.55□□□□□ -2.32
DDX58O95786 RNA5SP330-201ENST00000517096 96 ntBASIC0.55□□□□□ -2.32
DDX58O95786 Y_RNA.757-201ENST00000578934 114 ntBASIC0.55□□□□□ -2.32
DDX58O95786 AC141273.2-201ENST00000618989 130 ntBASIC0.55□□□□□ -2.32
DDX58O95786 RNU6-690P-201ENST00000365242 106 ntBASIC0.54□□□□□ -2.32
DDX58O95786 Y_RNA.552-201ENST00000384665 112 ntBASIC0.54□□□□□ -2.32
DDX58O95786 SNORA75.5-201ENST00000391291 81 ntBASIC0.54□□□□□ -2.32
DDX58O95786 RN7SKP12-201ENST00000516275 143 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AP002392.1-201ENST00000537692 208 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC072026.1-201ENST00000605023 201 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC078938.1-201ENST00000620993 318 ntBASIC0.54□□□□□ -2.32
DDX58O95786 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
DDX58O95786 Y_RNA.13-201ENST00000362403 112 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNA5SP457-201ENST00000363657 124 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-379P-201ENST00000363813 104 ntBASIC0.53□□□□□ -2.32
DDX58O95786 Y_RNA.258-201ENST00000364613 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 Y_RNA.476-201ENST00000384347 108 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-588P-201ENST00000410281 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-1086P-201ENST00000410930 100 ntBASIC0.53□□□□□ -2.32
DDX58O95786 MTATP6P21-201ENST00000440681 189 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-388P-201ENST00000517012 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 RNU6-389P-201ENST00000517048 105 ntBASIC0.53□□□□□ -2.32
DDX58O95786 MIR8087-201ENST00000612745 78 ntBASIC0.53□□□□□ -2.32
DDX58O95786 SNORD18B-201ENST00000365659 72 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNU6-949P-201ENST00000384040 107 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNA5SP144-201ENST00000410846 116 ntBASIC0.52□□□□□ -2.33
DDX58O95786 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNA5SP33-201ENST00000516687 98 ntBASIC0.52□□□□□ -2.33
DDX58O95786 RNU6-1258P-201ENST00000516911 111 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms