Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC021613.1-201ENST00000623880 111 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNA5SP133-201ENST00000363368 119 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNU4-16P-201ENST00000364737 141 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 SNORA53-201ENST00000391141 249 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNU2-55P-201ENST00000411146 174 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNA5SP153-201ENST00000516498 76 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 MIR3925-201ENST00000584674 77 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 MIR548AD-201ENST00000584780 82 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 AL442067.1-201ENST00000613261 223 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 RNU6-161P-201ENST00000363051 106 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 RNU6-326P-201ENST00000365480 107 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 RNU6-269P-201ENST00000391077 97 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 RPL21P38-201ENST00000418090 167 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 RNU7-79P-201ENST00000516082 62 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 MIR5688-201ENST00000580619 83 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 AC097639.2-201ENST00000603159 172 ntBASIC-0.39□□□□□ -2.47
NPHP4O75161 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 RNU6-702P-201ENST00000364982 107 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 RNU6-806P-201ENST00000365147 105 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 MIR635-201ENST00000384830 98 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 RNU6-823P-201ENST00000391042 103 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 AL606845.1-201ENST00000404881 255 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.4□□□□□ -2.47
NPHP4O75161 MTND4P19-201ENST00000446659 478 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 RNU6-561P-201ENST00000516222 102 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 AC037487.3-201ENST00000606668 112 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 AL162376.1-201ENST00000624117 175 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 U6.109-201ENST00000636749 87 ntBASIC-0.4□□□□□ -2.47
NPHP4O75161 RNU4-58P-201ENST00000363192 141 ntBASIC-0.41□□□□□ -2.48
NPHP4O75161 RNU7-104P-201ENST00000459398 79 ntBASIC-0.41□□□□□ -2.48
NPHP4O75161 FGF7P4-201ENST00000509595 295 ntBASIC-0.41□□□□□ -2.48
NPHP4O75161 RNU6-320P-201ENST00000516511 106 ntBASIC-0.41□□□□□ -2.48
NPHP4O75161 RNU7-161P-201ENST00000517289 62 ntBASIC-0.41□□□□□ -2.48
NPHP4O75161 MIR5706-201ENST00000579841 80 ntBASIC-0.41□□□□□ -2.48
NPHP4O75161 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.41□□□□□ -2.48
NPHP4O75161 MIR101-2-201ENST00000362195 79 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 SNORA63.7-201ENST00000365579 123 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 SNORA22B-201ENST00000383876 138 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 MT-TQ-201ENST00000387372 72 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
NPHP4O75161 ELOCP20-201ENST00000422460 345 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 SNORD4A-201ENST00000459174 72 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 RNU7-70P-201ENST00000516941 66 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 AP003072.1-201ENST00000531740 145 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 AC139792.2-201ENST00000624218 587 ntBASIC-0.42□□□□□ -2.48
NPHP4O75161 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 RBMX2P4-201ENST00000441256 376 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 MTND4LP30-201ENST00000454092 297 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 RNY3P15-201ENST00000516297 97 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 RNU6-180P-201ENST00000516697 61 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 RNU2-60P-201ENST00000517290 128 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 MIR4677-201ENST00000584153 80 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 MIR6514-201ENST00000622549 70 ntBASIC-0.43□□□□□ -2.48
NPHP4O75161 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.44□□□□□ -2.48
NPHP4O75161 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.44□□□□□ -2.48
NPHP4O75161 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
NPHP4O75161 RNU4-63P-201ENST00000411313 118 ntBASIC-0.44□□□□□ -2.48
NPHP4O75161 RNU6-875P-201ENST00000516488 106 ntBASIC-0.44□□□□□ -2.48
NPHP4O75161 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.44□□□□□ -2.48
NPHP4O75161 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.44□□□□□ -2.48
NPHP4O75161 MIR369-201ENST00000362155 70 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 RNY3P5-201ENST00000384127 102 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 SNORA32.3-201ENST00000384772 121 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 MIR1252-201ENST00000408861 65 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 SNORA40.15-201ENST00000516884 107 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 IGKV1-22-201ENST00000524313 326 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 AC138749.4-201ENST00000563970 127 ntBASIC-0.45□□□□□ -2.48
NPHP4O75161 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
NPHP4O75161 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 SNORA18.1-201ENST00000363418 128 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 RNU6-770P-201ENST00000363929 105 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 RNU6-101P-201ENST00000410323 104 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 RNU6-651P-201ENST00000411040 105 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 MTND5P22-201ENST00000458380 195 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 AC082651.2-201ENST00000496833 166 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 uc_338.28-201ENST00000612082 187 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 AC090971.5-201ENST00000621102 293 ntBASIC-0.46□□□□□ -2.48
NPHP4O75161 UBE2WP1-201ENST00000362030 340 ntBASIC-0.47□□□□□ -2.48
NPHP4O75161 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 222.3 ms