Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SNORA67.1-201ENST00000364749 141 ntBASIC2.6□□□□□ -1.99
PTCD1O75127 Y_RNA.567-201ENST00000384736 106 ntBASIC2.6□□□□□ -1.99
PTCD1O75127 AP000942.3-201ENST00000603702 160 ntBASIC2.6□□□□□ -1.99
PTCD1O75127 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PTCD1O75127 Y_RNA.338-201ENST00000365320 114 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 RNA5SP259-201ENST00000365541 109 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 Y_RNA.448-201ENST00000384185 108 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 MIR520C-201ENST00000385005 87 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 MIR548G-201ENST00000408442 89 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 AC093729.1-201ENST00000513074 128 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 RNU7-43P-201ENST00000516554 64 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 SNORD67.1-201ENST00000516618 108 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 AC105081.1-201ENST00000617727 106 ntBASIC2.59□□□□□ -1.99
PTCD1O75127 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
PTCD1O75127 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
PTCD1O75127 RNU6-439P-201ENST00000384188 106 ntBASIC2.58□□□□□ -2
PTCD1O75127 MIR519C-201ENST00000385053 87 ntBASIC2.58□□□□□ -2
PTCD1O75127 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.58□□□□□ -2
PTCD1O75127 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
PTCD1O75127 RNU6-1321P-201ENST00000390905 107 ntBASIC2.58□□□□□ -2
PTCD1O75127 RNA5SP212-201ENST00000391223 107 ntBASIC2.58□□□□□ -2
PTCD1O75127 AL161932.1-201ENST00000437408 146 ntBASIC2.58□□□□□ -2
PTCD1O75127 RPS29P28-201ENST00000446439 141 ntBASIC2.58□□□□□ -2
PTCD1O75127 MIR4764-201ENST00000580680 88 ntBASIC2.58□□□□□ -2
PTCD1O75127 MIR194-1-201ENST00000384892 85 ntBASIC2.57□□□□□ -2
PTCD1O75127 MIR181B2-201ENST00000385004 89 ntBASIC2.57□□□□□ -2
PTCD1O75127 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
PTCD1O75127 snoU13.16-201ENST00000459350 104 ntBASIC2.57□□□□□ -2
PTCD1O75127 RNU6-322P-201ENST00000516010 103 ntBASIC2.57□□□□□ -2
PTCD1O75127 RNU7-35P-201ENST00000517174 62 ntBASIC2.57□□□□□ -2
PTCD1O75127 AC008133.2-201ENST00000624540 351 ntBASIC2.57□□□□□ -2
PTCD1O75127 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PTCD1O75127 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PTCD1O75127 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.56□□□□□ -2
PTCD1O75127 SNORA16B-201ENST00000364674 135 ntBASIC2.56□□□□□ -2
PTCD1O75127 MIR513A1-201ENST00000385138 129 ntBASIC2.56□□□□□ -2
PTCD1O75127 AC003989.2-201ENST00000440224 169 ntBASIC2.56□□□□□ -2
PTCD1O75127 AC245047.7-201ENST00000440265 293 ntBASIC2.56□□□□□ -2
PTCD1O75127 AC087499.7-201ENST00000441958 109 ntBASIC2.56□□□□□ -2
PTCD1O75127 MIR4287-201ENST00000579398 78 ntBASIC2.56□□□□□ -2
PTCD1O75127 MIR5089-201ENST00000580047 84 ntBASIC2.56□□□□□ -2
PTCD1O75127 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.56□□□□□ -2
PTCD1O75127 Y_RNA.57-201ENST00000362806 113 ntBASIC2.55□□□□□ -2
PTCD1O75127 Y_RNA.173-201ENST00000363776 113 ntBASIC2.55□□□□□ -2
PTCD1O75127 AL450471.1-201ENST00000447509 127 ntBASIC2.55□□□□□ -2
PTCD1O75127 AC104435.1-201ENST00000483483 166 ntBASIC2.55□□□□□ -2
PTCD1O75127 RNA5SP182-201ENST00000516064 82 ntBASIC2.55□□□□□ -2
PTCD1O75127 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.55□□□□□ -2
PTCD1O75127 MIR8065-201ENST00000620577 100 ntBASIC2.55□□□□□ -2
PTCD1O75127 Y_RNA.164-201ENST00000363709 102 ntBASIC2.54□□□□□ -2
PTCD1O75127 SNORA17.3-201ENST00000391159 129 ntBASIC2.54□□□□□ -2
PTCD1O75127 JTBP1-201ENST00000441314 247 ntBASIC2.54□□□□□ -2
PTCD1O75127 SPINT5P-201ENST00000448174 155 ntBASIC2.54□□□□□ -2
PTCD1O75127 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.54□□□□□ -2
PTCD1O75127 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
PTCD1O75127 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.54□□□□□ -2
PTCD1O75127 SNORA2B-201ENST00000384583 137 ntBASIC2.53□□□□□ -2
PTCD1O75127 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTCD1O75127 RNU7-137P-201ENST00000516788 62 ntBASIC2.53□□□□□ -2
PTCD1O75127 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.53□□□□□ -2
PTCD1O75127 RNU6-90P-201ENST00000606352 106 ntBASIC2.53□□□□□ -2
PTCD1O75127 MIR8055-201ENST00000610739 97 ntBASIC2.53□□□□□ -2
PTCD1O75127 AL773524.1-201ENST00000614065 229 ntBASIC2.53□□□□□ -2
PTCD1O75127 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PTCD1O75127 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTCD1O75127 ZNF355P-201ENST00000427301 3216 ntBASIC2.53□□□□□ -2.01
PTCD1O75127 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
PTCD1O75127 AC108667.1-201ENST00000428618 249 ntBASIC2.52□□□□□ -2.01
PTCD1O75127 AC114801.3-201ENST00000510231 177 ntBASIC2.52□□□□□ -2.01
PTCD1O75127 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
PTCD1O75127 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.52□□□□□ -2.01
PTCD1O75127 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.52□□□□□ -2.01
PTCD1O75127 U7.4-201ENST00000614961 63 ntBASIC2.52□□□□□ -2.01
PTCD1O75127 AC012676.2-201ENST00000619258 186 ntBASIC2.52□□□□□ -2.01
PTCD1O75127 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTCD1O75127 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTCD1O75127 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PTCD1O75127 MIRLET7G-201ENST00000362280 84 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 RNU6-865P-201ENST00000364772 107 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 RNU6-1086P-201ENST00000410930 100 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 AC244636.1-201ENST00000421152 228 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.51□□□□□ -2.01
PTCD1O75127 SCARNA18B-201ENST00000458806 135 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 RNU7-79P-201ENST00000516082 62 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 SNORA25.13-201ENST00000516395 103 ntBASIC2.51□□□□□ -2.01
PTCD1O75127 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PTCD1O75127 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTCD1O75127 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTCD1O75127 RNA5SP138-201ENST00000365098 114 ntBASIC2.5□□□□□ -2.01
PTCD1O75127 Y_RNA.545-201ENST00000384652 105 ntBASIC2.5□□□□□ -2.01
PTCD1O75127 MIR653-201ENST00000385279 96 ntBASIC2.5□□□□□ -2.01
PTCD1O75127 RNU6-922P-201ENST00000516753 99 ntBASIC2.5□□□□□ -2.01
PTCD1O75127 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.5□□□□□ -2.01
PTCD1O75127 MIR4251-201ENST00000635819 61 ntBASIC2.5□□□□□ -2.01
PTCD1O75127 RNU6-315P-201ENST00000362666 107 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 RNA5SP133-201ENST00000363368 119 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 RNA5SP160-201ENST00000364866 120 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 RNU6-129P-201ENST00000391022 107 ntBASIC2.49□□□□□ -2.01
PTCD1O75127 AL161935.2-201ENST00000414627 60 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 207.4 ms