Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RNU6-934P-201ENST00000365154 107 ntBASIC1.54□□□□□ -2.16
KLF4O43474 RNU6-880P-201ENST00000384526 107 ntBASIC1.54□□□□□ -2.16
KLF4O43474 SNORD13-201ENST00000459299 104 ntBASIC1.54□□□□□ -2.16
KLF4O43474 RNU7-40P-201ENST00000516397 64 ntBASIC1.54□□□□□ -2.16
KLF4O43474 MIR4679-2-201ENST00000578358 77 ntBASIC1.54□□□□□ -2.16
KLF4O43474 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
KLF4O43474 MIR26B-201ENST00000362251 77 ntBASIC1.53□□□□□ -2.16
KLF4O43474 RNU6-949P-201ENST00000384040 107 ntBASIC1.53□□□□□ -2.16
KLF4O43474 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.53□□□□□ -2.16
KLF4O43474 AC027335.2-201ENST00000624030 375 ntBASIC1.53□□□□□ -2.16
KLF4O43474 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
KLF4O43474 SNORD115-19-201ENST00000363098 82 ntBASIC1.52□□□□□ -2.17
KLF4O43474 SNORD115-18-201ENST00000363293 82 ntBASIC1.52□□□□□ -2.17
KLF4O43474 SNORD114-10-201ENST00000363409 72 ntBASIC1.52□□□□□ -2.17
KLF4O43474 SNORD115-17-201ENST00000364612 82 ntBASIC1.52□□□□□ -2.17
KLF4O43474 Y_RNA.507-201ENST00000384500 99 ntBASIC1.52□□□□□ -2.17
KLF4O43474 Y_RNA.676-201ENST00000516393 96 ntBASIC1.52□□□□□ -2.17
KLF4O43474 AC087741.2-201ENST00000619415 172 ntBASIC1.52□□□□□ -2.17
KLF4O43474 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
KLF4O43474 MIR30D-201ENST00000362283 70 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-1290P-201ENST00000362957 109 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNY1P13-201ENST00000365030 105 ntBASIC1.51□□□□□ -2.17
KLF4O43474 MT-TI-201ENST00000387365 69 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-447P-201ENST00000410293 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-1118P-201ENST00000410382 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-1076P-201ENST00000410397 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-355P-201ENST00000410427 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-791P-201ENST00000410467 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-705P-201ENST00000410601 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-1100P-201ENST00000410691 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-860P-201ENST00000410860 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-1217P-201ENST00000411276 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RNU6-785P-201ENST00000411324 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 RPL39P34-201ENST00000477141 156 ntBASIC1.51□□□□□ -2.17
KLF4O43474 U6.90-201ENST00000614007 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 U6.70-201ENST00000620287 104 ntBASIC1.51□□□□□ -2.17
KLF4O43474 Y_RNA.49-201ENST00000362714 112 ntBASIC1.5□□□□□ -2.17
KLF4O43474 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
KLF4O43474 Y_RNA.338-201ENST00000365320 114 ntBASIC1.5□□□□□ -2.17
KLF4O43474 Y_RNA.362-201ENST00000365518 110 ntBASIC1.5□□□□□ -2.17
KLF4O43474 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
KLF4O43474 MIR200A-201ENST00000384875 90 ntBASIC1.5□□□□□ -2.17
KLF4O43474 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
KLF4O43474 FABP5P4-201ENST00000437203 171 ntBASIC1.5□□□□□ -2.17
KLF4O43474 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
KLF4O43474 MIR502-201ENST00000606349 86 ntBASIC1.5□□□□□ -2.17
KLF4O43474 AL136317.1-201ENST00000612653 226 ntBASIC1.5□□□□□ -2.17
KLF4O43474 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
KLF4O43474 MIR1-1-201ENST00000362147 71 ntBASIC1.49□□□□□ -2.17
KLF4O43474 Y_RNA.309-201ENST00000365046 111 ntBASIC1.49□□□□□ -2.17
KLF4O43474 MIR1257-201ENST00000408490 117 ntBASIC1.49□□□□□ -2.17
KLF4O43474 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.49□□□□□ -2.17
KLF4O43474 SNORD93-201ENST00000408813 74 ntBASIC1.49□□□□□ -2.17
KLF4O43474 MIR1912-201ENST00000410389 80 ntBASIC1.49□□□□□ -2.17
KLF4O43474 RNU6-735P-201ENST00000410612 107 ntBASIC1.49□□□□□ -2.17
KLF4O43474 AC133485.1-201ENST00000567176 124 ntBASIC1.49□□□□□ -2.17
KLF4O43474 MIR4498-201ENST00000577599 66 ntBASIC1.49□□□□□ -2.17
KLF4O43474 MIR4781-201ENST00000585250 76 ntBASIC1.49□□□□□ -2.17
KLF4O43474 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KLF4O43474 RNU6-616P-201ENST00000384353 107 ntBASIC1.48□□□□□ -2.17
KLF4O43474 MIR19B1-201ENST00000384829 87 ntBASIC1.48□□□□□ -2.17
KLF4O43474 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
KLF4O43474 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
KLF4O43474 SNORD67.1-201ENST00000516618 108 ntBASIC1.48□□□□□ -2.17
KLF4O43474 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.48□□□□□ -2.17
KLF4O43474 RNU6-94P-201ENST00000607728 107 ntBASIC1.48□□□□□ -2.17
KLF4O43474 AC023934.1-201ENST00000574529 2389 ntBASIC1.48□□□□□ -2.17
KLF4O43474 RNU4-62P-201ENST00000410125 130 ntBASIC1.47□□□□□ -2.17
KLF4O43474 SNORD83.1-201ENST00000411362 77 ntBASIC1.47□□□□□ -2.17
KLF4O43474 RPS26P5-201ENST00000418544 335 ntBASIC1.47□□□□□ -2.17
KLF4O43474 BTF3P4-201ENST00000418852 495 ntBASIC1.47□□□□□ -2.17
KLF4O43474 RNU7-2P-201ENST00000516096 62 ntBASIC1.47□□□□□ -2.17
KLF4O43474 MIR4771-2-201ENST00000577758 74 ntBASIC1.47□□□□□ -2.17
KLF4O43474 MIR4771-1-201ENST00000582617 74 ntBASIC1.47□□□□□ -2.17
KLF4O43474 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
KLF4O43474 SNORA63.5-201ENST00000363548 123 ntBASIC1.46□□□□□ -2.18
KLF4O43474 MIR100-201ENST00000385259 80 ntBASIC1.46□□□□□ -2.18
KLF4O43474 RNU7-137P-201ENST00000516788 62 ntBASIC1.46□□□□□ -2.18
KLF4O43474 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
KLF4O43474 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.46□□□□□ -2.18
KLF4O43474 AL162726.3-218ENST00000636401 95 ntBASIC1.46□□□□□ -2.18
KLF4O43474 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
KLF4O43474 SNORD115-35-201ENST00000365122 82 ntBASIC1.45□□□□□ -2.18
KLF4O43474 Y_RNA.344-201ENST00000365381 112 ntBASIC1.45□□□□□ -2.18
KLF4O43474 RPS29P28-201ENST00000446439 141 ntBASIC1.45□□□□□ -2.18
KLF4O43474 RNU7-185P-201ENST00000459215 60 ntBASIC1.45□□□□□ -2.18
KLF4O43474 RNA5SP404-201ENST00000517118 132 ntBASIC1.45□□□□□ -2.18
KLF4O43474 MIR6129-201ENST00000616087 109 ntBASIC1.45□□□□□ -2.18
KLF4O43474 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
KLF4O43474 Y_RNA.4-201ENST00000362333 112 ntBASIC1.44□□□□□ -2.18
KLF4O43474 Y_RNA.35-201ENST00000362601 101 ntBASIC1.44□□□□□ -2.18
KLF4O43474 Y_RNA.85-201ENST00000363014 111 ntBASIC1.44□□□□□ -2.18
KLF4O43474 Y_RNA.98-201ENST00000363109 102 ntBASIC1.44□□□□□ -2.18
KLF4O43474 Y_RNA.155-201ENST00000363632 101 ntBASIC1.44□□□□□ -2.18
KLF4O43474 RNU1-124P-201ENST00000363861 145 ntBASIC1.44□□□□□ -2.18
KLF4O43474 RNU4-67P-201ENST00000364569 141 ntBASIC1.44□□□□□ -2.18
KLF4O43474 RNU6-865P-201ENST00000364772 107 ntBASIC1.44□□□□□ -2.18
KLF4O43474 Y_RNA.281-201ENST00000364774 94 ntBASIC1.44□□□□□ -2.18
KLF4O43474 RNU6-53P-201ENST00000365367 106 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms