Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU6-453P-201ENST00000516819 85 ntBASIC-0.57□□□□□ -2.5
TRAV41A0A0B4J266 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.57□□□□□ -2.5
TRAV41A0A0B4J266 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 SNORA25.1-201ENST00000362326 128 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 U8.6-201ENST00000364939 135 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 SNORA27.4-201ENST00000516650 95 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 RNU7-137P-201ENST00000516788 62 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 SCARNA15-202ENST00000516881 127 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 AL365205.2-201ENST00000594586 68 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 AL359881.1-201ENST00000602916 267 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 MIR8064-201ENST00000612863 90 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 MIR1302-1-201ENST00000637932 143 ntBASIC-0.58□□□□□ -2.5
TRAV41A0A0B4J266 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 RNU6-211P-201ENST00000384047 107 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 RNY3P5-201ENST00000384127 102 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 AL606845.1-201ENST00000404881 255 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 MIR1302-11-201ENST00000408051 138 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 MIR1302-9-201ENST00000408365 138 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 MIR1302-10-201ENST00000408734 138 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 SNORD67.1-201ENST00000516618 108 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 MIR548H5-201ENST00000580314 60 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 MIR4263-201ENST00000584745 83 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 MIR1302-2-201ENST00000607096 138 ntBASIC-0.59□□□□□ -2.5
TRAV41A0A0B4J266 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-326P-201ENST00000365480 107 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-449P-201ENST00000383914 107 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 SNORA32-201ENST00000384072 121 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-284P-201ENST00000411105 106 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 SNORD19B-201ENST00000459623 84 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 TRAJ51-201ENST00000504127 63 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-976P-201ENST00000516086 111 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-561P-201ENST00000516222 102 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 MIR4636-201ENST00000582271 80 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 AC098479.1-201ENST00000609225 154 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 AL132765.2-201ENST00000610812 351 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 AC105081.1-201ENST00000617727 106 ntBASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.6□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-509P-201ENST00000363519 107 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 MIR599-201ENST00000385069 95 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 SNORA53-201ENST00000391141 249 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 RNA5SP144-201ENST00000410846 116 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 MTND4LP30-201ENST00000454092 297 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 AC082651.2-201ENST00000496833 166 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 RNU7-70P-201ENST00000516941 66 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 FTX_2.1-201ENST00000618816 94 ntBASIC-0.61□□□□□ -2.51
TRAV41A0A0B4J266 MIR101-1-201ENST00000362265 75 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 RNU4-73P-201ENST00000363164 141 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-480P-201ENST00000384332 107 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-893P-201ENST00000458841 100 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 AC114755.3-201ENST00000481111 251 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 MIR3920-201ENST00000581751 86 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 MIR4432-201ENST00000581823 84 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 MIR4493-201ENST00000584016 73 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 AC006504.6-201ENST00000590142 199 ntBASIC-0.62□□□□□ -2.51
TRAV41A0A0B4J266 UBE2WP1-201ENST00000362030 340 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 RNU4-70P-201ENST00000384579 139 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-429P-201ENST00000384582 108 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 MIR616-201ENST00000385293 97 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 AC098614.3-201ENST00000438957 440 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 RNU7-188P-201ENST00000517063 64 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 AC090574.1-201ENST00000623186 233 ntBASIC-0.63□□□□□ -2.51
TRAV41A0A0B4J266 RNA5SP98-201ENST00000363158 137 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-450P-201ENST00000364654 107 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 MTND4LP11-201ENST00000422184 280 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 AC097635.1-201ENST00000450678 155 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 RNU7-113P-201ENST00000459273 62 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 RNA5SP33-201ENST00000516687 98 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 MIR4473-201ENST00000583731 91 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 AC037487.3-201ENST00000606668 112 ntBASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.64□□□□□ -2.51
TRAV41A0A0B4J266 SNORD115-2-201ENST00000362842 82 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 SNORD114-10-201ENST00000363409 72 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.65□□□□□ -2.51
TRAV41A0A0B4J266 SNORD115-20-201ENST00000365099 82 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms