Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 HSBP1P2-201ENST00000299671 229 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 RNU6-480P-201ENST00000384332 107 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 RNU6-24P-201ENST00000384440 107 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 MIR513A1-201ENST00000385138 129 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 AC133485.1-201ENST00000567176 124 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHB11Q9Y5F2 SNORA2B-201ENST00000384583 137 ntBASIC2.58□□□□□ -2
PCDHB11Q9Y5F2 MIR181B2-201ENST00000385004 89 ntBASIC2.58□□□□□ -2
PCDHB11Q9Y5F2 SNORD41-201ENST00000386967 70 ntBASIC2.58□□□□□ -2
PCDHB11Q9Y5F2 AC027119.1-201ENST00000440877 241 ntBASIC2.58□□□□□ -2
PCDHB11Q9Y5F2 RNA5SP445-201ENST00000515889 115 ntBASIC2.58□□□□□ -2
PCDHB11Q9Y5F2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.58□□□□□ -2
PCDHB11Q9Y5F2 AC020891.4-201ENST00000605745 93 ntBASIC2.58□□□□□ -2
PCDHB11Q9Y5F2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 RNY1P2-201ENST00000364820 117 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 RNA5SP259-201ENST00000365541 109 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 RNU6-949P-201ENST00000384040 107 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 JTBP1-201ENST00000441314 247 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 RPS29P11-201ENST00000496507 171 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 RNA5SP148-201ENST00000516527 94 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 SNORD53-201ENST00000579969 78 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 MIR4635-201ENST00000583759 79 ntBASIC2.57□□□□□ -2
PCDHB11Q9Y5F2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 U8.2-201ENST00000363156 134 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 SNORD115-27-201ENST00000364430 82 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 RNU6-652P-201ENST00000365488 107 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 RNU6-1296P-201ENST00000383879 107 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 AC244023.1-201ENST00000426884 112 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 snoU13.2-201ENST00000459201 104 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 AC055731.1-201ENST00000474387 401 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 RNA5SP24-201ENST00000516478 95 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 AC242498.1-201ENST00000604134 111 ntBASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHB11Q9Y5F2 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
PCDHB11Q9Y5F2 RNA5SP432-201ENST00000362480 116 ntBASIC2.55□□□□□ -2
PCDHB11Q9Y5F2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PCDHB11Q9Y5F2 AC019288.1-201ENST00000557918 224 ntBASIC2.55□□□□□ -2
PCDHB11Q9Y5F2 PRELID3BP2-201ENST00000605362 201 ntBASIC2.55□□□□□ -2
PCDHB11Q9Y5F2 AC245884.12-201ENST00000615364 59 ntBASIC2.55□□□□□ -2
PCDHB11Q9Y5F2 MIR3192-201ENST00000584920 77 ntBASIC2.54□□□□□ -2
PCDHB11Q9Y5F2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHB11Q9Y5F2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHB11Q9Y5F2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PCDHB11Q9Y5F2 WWP1P1-201ENST00000466609 2769 ntBASIC2.54□□□□□ -2
PCDHB11Q9Y5F2 Y_RNA.316-201ENST00000365118 111 ntBASIC2.53□□□□□ -2
PCDHB11Q9Y5F2 MIR519C-201ENST00000385053 87 ntBASIC2.53□□□□□ -2
PCDHB11Q9Y5F2 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
PCDHB11Q9Y5F2 RNU6-922P-201ENST00000516753 99 ntBASIC2.53□□□□□ -2
PCDHB11Q9Y5F2 AL357312.1-201ENST00000603879 298 ntBASIC2.53□□□□□ -2
PCDHB11Q9Y5F2 AP000753.3-201ENST00000604083 169 ntBASIC2.53□□□□□ -2
PCDHB11Q9Y5F2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
PCDHB11Q9Y5F2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 RNA5SP133-201ENST00000363368 119 ntBASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 RNU6-524P-201ENST00000384270 107 ntBASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 MIR588-201ENST00000384900 83 ntBASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 RNA5SP212-201ENST00000391223 107 ntBASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 MIR1302-7-201ENST00000408841 72 ntBASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 AP000942.3-201ENST00000603702 160 ntBASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 AL096861.1-201ENST00000610899 123 ntBASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHB11Q9Y5F2 Y_RNA.168-201ENST00000363740 102 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 SNORA6-201ENST00000384033 151 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 RNU6-439P-201ENST00000384188 106 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 MIR504-201ENST00000385065 83 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 MIR563-201ENST00000385080 79 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 snoU13.26-201ENST00000459452 105 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 AC090897.1-201ENST00000580909 226 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PCDHB11Q9Y5F2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 RNA5SP276-201ENST00000362580 94 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 SNORD23.1-201ENST00000408212 104 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 SNRPGP12-201ENST00000449481 213 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 AC093729.1-201ENST00000513074 128 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 RNU6-250P-201ENST00000516958 103 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 AC138749.4-201ENST00000563970 127 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 MIR3670-2-201ENST00000582974 65 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 MIR3670-1-201ENST00000584160 65 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 MIR3670-3-201ENST00000584855 65 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 MIR3670-4-201ENST00000612260 65 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 MIR7843-201ENST00000622274 79 ntBASIC2.5□□□□□ -2.01
PCDHB11Q9Y5F2 RNU6-396P-201ENST00000365369 105 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 RNA5SP210-201ENST00000391034 120 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 RNU6-519P-201ENST00000410590 108 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms