Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL022718.1-201ENST00000412004 84 ntBASIC1.75□□□□□ -2.13
TRIM55Q9BYV6 RNY4P20-201ENST00000516678 93 ntBASIC1.75□□□□□ -2.13
TRIM55Q9BYV6 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
TRIM55Q9BYV6 U6.95-201ENST00000636931 70 ntBASIC1.75□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.74□□□□□ -2.13
TRIM55Q9BYV6 RNU6-910P-201ENST00000390844 107 ntBASIC1.74□□□□□ -2.13
TRIM55Q9BYV6 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.74□□□□□ -2.13
TRIM55Q9BYV6 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
TRIM55Q9BYV6 RNU6-919P-201ENST00000516731 104 ntBASIC1.74□□□□□ -2.13
TRIM55Q9BYV6 AL670379.3-201ENST00000605040 251 ntBASIC1.74□□□□□ -2.13
TRIM55Q9BYV6 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 MIRLET7F2-201ENST00000385277 83 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 SNORA75.2-201ENST00000391138 150 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 SNORA75.3-201ENST00000391231 150 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 RNU6-970P-201ENST00000516312 107 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 RNU6-1258P-201ENST00000516911 111 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 SEPT14P17-201ENST00000617978 177 ntBASIC1.73□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 RNU6-654P-201ENST00000364373 107 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 Y_RNA.346-201ENST00000365385 112 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 MT-TN-201ENST00000387400 73 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 RNU6-613P-201ENST00000410412 108 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 AC244023.1-201ENST00000426884 112 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 AC022523.2-201ENST00000561045 150 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 MIR4781-201ENST00000585250 76 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 AC242498.1-201ENST00000604134 111 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 snoU13.31-201ENST00000607291 104 ntBASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
TRIM55Q9BYV6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 MIR378A-201ENST00000362177 66 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 SNORA22-201ENST00000383907 134 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 SNORD116-21-201ENST00000384507 92 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 AL512326.2-201ENST00000426359 151 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 RNU7-113P-201ENST00000459273 62 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 MIR4264-201ENST00000583520 66 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 AP000753.3-201ENST00000604083 169 ntBASIC1.71□□□□□ -2.14
TRIM55Q9BYV6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 SNORD12C-201ENST00000386307 89 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 MT-TI-201ENST00000387365 69 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 RNY4P18-201ENST00000391107 89 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 RNA5SP95-201ENST00000410319 137 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 BTF3P4-201ENST00000418852 495 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 AC113410.1-201ENST00000505029 247 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 SNORD79.1-201ENST00000516069 84 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 AC004812.1-201ENST00000540773 146 ntBASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM55Q9BYV6 RNU6-834P-201ENST00000362367 110 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 RNA5SP327-201ENST00000362494 101 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 SNORA80D-201ENST00000384488 135 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 Y_RNA.531-201ENST00000384589 121 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 RNU6-1104P-201ENST00000384723 104 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 RNU4-62P-201ENST00000410125 130 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 RNA5SP136-201ENST00000410906 107 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 AL591704.2-201ENST00000421658 181 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 SNORA70.22-201ENST00000517160 124 ntBASIC1.69□□□□□ -2.14
TRIM55Q9BYV6 MIR377-201ENST00000362145 69 ntBASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 SNORD26-201ENST00000384147 75 ntBASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 Y_RNA.470-201ENST00000384307 117 ntBASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 RNU6-205P-201ENST00000390858 107 ntBASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 RNU1-98P-201ENST00000458992 160 ntBASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 RNU7-21P-201ENST00000459430 62 ntBASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 Y_RNA.709-201ENST00000516952 92 ntBASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.68□□□□□ -2.14
TRIM55Q9BYV6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.67□□□□□ -2.14
TRIM55Q9BYV6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM55Q9BYV6 RNU6-589P-201ENST00000516485 107 ntBASIC1.67□□□□□ -2.14
TRIM55Q9BYV6 MIR4303-201ENST00000581299 66 ntBASIC1.67□□□□□ -2.14
TRIM55Q9BYV6 SNORD115-2-201ENST00000362842 82 ntBASIC1.66□□□□□ -2.14
TRIM55Q9BYV6 SNORD115-20-201ENST00000365099 82 ntBASIC1.66□□□□□ -2.14
TRIM55Q9BYV6 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.66□□□□□ -2.14
TRIM55Q9BYV6 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 MIR222-201ENST00000384992 110 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 RNU6-321P-201ENST00000410912 106 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 snoU13.2-201ENST00000459201 104 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 COX6CP6-201ENST00000490840 228 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 PDCD5P2-201ENST00000507570 312 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 RNA5SP33-201ENST00000516687 98 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 AC007012.1-201ENST00000567192 175 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 MIR6740-201ENST00000618268 113 ntBASIC1.65□□□□□ -2.15
TRIM55Q9BYV6 SNORA63.5-201ENST00000363548 123 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 Y_RNA.168-201ENST00000363740 102 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 RNU6-342P-201ENST00000384521 104 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 RNU6-880P-201ENST00000384526 107 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 MIR588-201ENST00000384900 83 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 SNORD12-201ENST00000391002 90 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 MIR1287-201ENST00000408492 90 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 AP1B1P2-201ENST00000416196 106 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 RNU7-62P-201ENST00000458856 62 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 RPS23P4-201ENST00000487908 423 ntBASIC1.64□□□□□ -2.15
TRIM55Q9BYV6 AL035470.1-201ENST00000622571 220 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 1137.9 ms